STRINGSTRING
FD1 FD1 LHCB3 LHCB3 FTSZ2-2 FTSZ2-2 NAC091 NAC091 HSP70-4 HSP70-4 MBP2C MBP2C FTSH5 FTSH5 ARC5 ARC5 FTSZ1 FTSZ1 PSBP1 PSBP1 FTSH1 FTSH1 LCY1 LCY1 T25N20.10 T25N20.10 LHCA1 LHCA1 psbE psbE petB petB PER33 PER33 FTSZ2-1 FTSZ2-1 FTSH2 FTSH2 DBP DBP F1C9.19 F1C9.19 petC petC LHCB5 LHCB5 LHCA3 LHCA3
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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FD1Ferredoxin-1, chloroplastic; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (148 aa)
LHCB3Chlorophyll a-b binding protein 3, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. Modulates the rate of photosystem II (PSII) state transitions and influences PSII macrostructure. Involved in PSII excitation energy transfer and charge separation during photosynthesis in thylakoids. (265 aa)
FTSZ2-2Cell division protein FtsZ homolog 2-2, chloroplastic; Exhibits GTPase activity (By similarity). Component of the plastid division machinery that forms a contractile ring at the division site. (473 aa)
NAC091NAC domain-containing protein 91; Transcription activator essential for the anti-viral defense called virus basal resistance response pathway. Not involved in HRT-mediated hypersensitive response (HR) and resistance to TCV. Binds DNA non specifically. Activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). (451 aa)
HSP70-4Heat shock 70 kDa protein 4; In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). ATP-dependent molecular chaperone that assists folding of unfolded or misfolded proteins under stress conditions. Mediates plastid precursor degradation to prevent cytosolic precursor accumulation, together with the E3 ubiquitin-protein ligase CHIP. Recognizes specific sequence motifs in tr [...] (650 aa)
MBP2CProtein MICROTUBULE BINDING PROTEIN 2C; Prevents homeodomain proteins (e.g. STM) association to plasmodesmata and, consequently, cell-to-cell transport. Binds to RNA. Alters STM RNA binding capacity. Regulates cytoskeleton (e.g. actin) organization that determinates cell shape. Regulates stomata patterning and drought tolerance. Involved in restricting tobamovirus (e.g. oilseed rape mosaic virus) infectivity, probably by interfering with cell-to-cell virus movement. Belongs to the microtubule binding protein 2C family. (326 aa)
FTSH5ATP-dependent zinc metalloprotease FTSH 5, chloroplastic; Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions. Not involved in the degradation of the light-harvesting complex of photosystem II (LHC II) or in thermotolerance. In the N-terminal section; belongs to the AAA ATPase family. (704 aa)
ARC5Dynamin-like protein ARC5; Probable GTPase component of both plastid and peroxisme division machinery. Required for the last steps of plastid division specifically in mesophyll-cell, when the narrow isthmus breaks, facilitating the separation of the daughter plastids. Necessary for peroxisome activities. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency. Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (777 aa)
FTSZ1Cell division protein FtsZ homolog 1, chloroplastic; Exhibits GTPase activity. Component of the plastid division machinery that forms a contractile ring at the division site. Required for plastid division in a dose-dependent manner. Involved in blue light-induced chloroplast movements. May regulate thylakoid development. Belongs to the FtsZ family. (433 aa)
PSBP1Oxygen-evolving enhancer protein 2-1, chloroplastic; May be involved in the regulation of photosystem II; Belongs to the psbP family. (263 aa)
FTSH1ATP-dependent zinc metalloprotease FTSH 1, chloroplastic; Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions. (716 aa)
LCY1Lycopene beta cyclase, chloroplastic; Involved in carotenoid biosynthesis. Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene. Major lycopene beta- cyclase that does not seem to be involved in neoxanthin synthesis. Involved in salt tolerance improvement by increasing synthesis of carotenoids, which impairs reactive oxygen species (ROS) and protects the photosynthetic system under salt stress. (501 aa)
T25N20.10Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. (205 aa)
LHCA1Chlorophyll a-b binding protein 6, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. (241 aa)
psbECytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (83 aa)
petBCytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
PER33Peroxidase 33; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue. (354 aa)
FTSZ2-1Cell division protein FtsZ homolog 2-1, chloroplastic; Exhibits GTPase activity. Component of the plastid division machinery that forms a contractile ring at the division site. Required for plastid division in a dose-dependent manner. Belongs to the FtsZ family. (478 aa)
FTSH2ATP-dependent zinc metalloprotease FTSH 2, chloroplastic; Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions, but not involved in thermotolerance. In the N-terminal section; belongs to the AAA ATPase family. (695 aa)
DBPRemorin; Exhibits a non sequence-specific DNA-binding activity. (190 aa)
F1C9.19Transferase. (666 aa)
petCCytochrome b6-f complex iron-sulfur subunit, chloroplastic; Essential protein for photoautotrophism. Confers resistance to photo-oxidative damages by contributing to the thermal dissipation of light energy and to lumenal acidification (increase of pH gradient). Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (By similarity). Belongs to the Rieske iron-sulfur protein family. (229 aa)
LHCB5Chlorophyll a-b binding protein CP26, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (280 aa)
LHCA3Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated, here photosystem I. (273 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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