Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BZIP8 | CYP73A5 | Q9CA46 | P92994 | Basic leucine zipper 8; Belongs to the bZIP family. | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | 0.726 |
| BZIP8 | DXS | Q9CA46 | Q38854 | Basic leucine zipper 8; Belongs to the bZIP family. | 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development. Belongs to the transketolase family. DXPS subfamily. | 0.514 |
| BZIP8 | MYB1 | Q9CA46 | Q42575 | Basic leucine zipper 8; Belongs to the bZIP family. | Transcription factor MYB1. | 0.661 |
| BZIP8 | MYB4 | Q9CA46 | Q9SZP1 | Basic leucine zipper 8; Belongs to the bZIP family. | Transcription repressor MYB4; Transcription repressor involved in regulation of protection against UV. Mediates transcriptional repression of CYP73A5, the gene encoding trans-cinnamate 4-monooxygenase, thereby regulating the accumulation of the UV-protectant compound sinapoylmalate. | 0.695 |
| BZIP8 | MYB86 | Q9CA46 | Q8LPH6 | Basic leucine zipper 8; Belongs to the bZIP family. | Transcription factor MYB86; Probable transcription factor. | 0.722 |
| BZIP8 | PAL1 | Q9CA46 | P35510 | Basic leucine zipper 8; Belongs to the bZIP family. | Phenylalanine ammonia-lyase 1; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton; Belongs to the PAL/histidase family. | 0.763 |
| BZIP8 | PAL2 | Q9CA46 | P45724 | Basic leucine zipper 8; Belongs to the bZIP family. | Phenylalanine ammonia-lyase 2; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton; Belongs to the PAL/histidase family. | 0.757 |
| BZIP8 | PAL3 | Q9CA46 | P45725 | Basic leucine zipper 8; Belongs to the bZIP family. | Phenylalanine ammonia-lyase 3; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.739 |
| BZIP8 | PAL4 | Q9CA46 | Q9SS45 | Basic leucine zipper 8; Belongs to the bZIP family. | Phenylalanine ammonia-lyase 4; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton; Belongs to the PAL/histidase family. | 0.747 |
| CYP73A5 | BZIP8 | P92994 | Q9CA46 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Basic leucine zipper 8; Belongs to the bZIP family. | 0.726 |
| CYP73A5 | DXPS3 | P92994 | Q9LFL9 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | 1-D-deoxyxylulose 5-phosphate synthase-like protein. | 0.410 |
| CYP73A5 | DXS | P92994 | Q38854 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development. Belongs to the transketolase family. DXPS subfamily. | 0.716 |
| CYP73A5 | F20O9.100 | P92994 | Q67Y55 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Probable aminotransferase TAT1; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. | 0.785 |
| CYP73A5 | F20O9.90 | P92994 | F4JL94 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Tyrosine transaminase family protein. | 0.792 |
| CYP73A5 | F9D16.60 | P92994 | Q8VYP2 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Probable aminotransferase TAT4. | 0.790 |
| CYP73A5 | MYB1 | P92994 | Q42575 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Transcription factor MYB1. | 0.541 |
| CYP73A5 | MYB32 | P92994 | O49608 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Transcription factor MYB32. | 0.797 |
| CYP73A5 | MYB4 | P92994 | Q9SZP1 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Transcription repressor MYB4; Transcription repressor involved in regulation of protection against UV. Mediates transcriptional repression of CYP73A5, the gene encoding trans-cinnamate 4-monooxygenase, thereby regulating the accumulation of the UV-protectant compound sinapoylmalate. | 0.897 |
| CYP73A5 | MYB86 | P92994 | Q8LPH6 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Transcription factor MYB86; Probable transcription factor. | 0.894 |
| CYP73A5 | PAL1 | P92994 | P35510 | Trans-cinnamate 4-monooxygenase; Controls carbon flux to pigments essential for pollination or UV protection, to numerous pytoalexins synthesized by plants when challenged by pathogens, and to lignins. | Phenylalanine ammonia-lyase 1; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton; Belongs to the PAL/histidase family. | 0.998 |
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