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RRP5 RRP5 T22I11.2 T22I11.2 NRPB7L NRPB7L PNP1 PNP1 Q500X1_ARATH Q500X1_ARATH MFE16.8 MFE16.8 NRPB7 NRPB7 F2P3.7 F2P3.7 PTAC10 PTAC10 RRP4 RRP4 PETs PETs IF2AH_ARATH IF2AH_ARATH PNP2 PNP2 F10A5.14 F10A5.14 RPS1 RPS1 F13K23.5 F13K23.5 Q94AW9_ARATH Q94AW9_ARATH F16M19.22 F16M19.22 EIF2A EIF2A Q9LK47_ARATH Q9LK47_ARATH PDE338 PDE338 SPT6 SPT6 K15E6.10 K15E6.10
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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RRP5rRNA biogenesis protein RRP5; Involved in the biogenesis of ribosomal RNA (rRNA). Required for the formation of 5.8S rRNA. Required for normal development of female gametophytes. (1920 aa)
T22I11.2Eukaryotic translation initiation factor 2 (eIF-2) family protein. (1092 aa)
NRPB7LDNA-directed RNA polymerase subunit 7-like protein. (200 aa)
PNP1Polyribonucleotide nucleotidyltransferase 1, chloroplastic; Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase. May be required for plastid ribosome assembly and non-coding RNA biogenesis and accumulation. Seems not required for efficient translation. Belongs to the polyribonucleotide nucleotidyltransferase family. (922 aa)
Q500X1_ARATHPNAS-3-like protein. (241 aa)
MFE16.8Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5; May be involved in pre-mRNA splicing. (1168 aa)
NRPB7DNA-directed RNA polymerase II subunit 7; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB7 is part of a subcomplex with NRPB4 that binds to a pocket formed by NRPB1, NRPB2 and NRPB6 at the base of the clamp element. The NRBP4-NRPB7 subcomplex se [...] (176 aa)
F2P3.7Translation initiation factor IF-1, chloroplastic; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (141 aa)
PTAC10Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10. (668 aa)
RRP4Exosome complex component RRP4 homolog; Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is an active and distributive 3'->5' exonuclease requiring a free 3'-OH on the substrate and releasing nucleoside 5'-monophosphates. Required for normal embryo development ; Belongs to the RRP4 family. (322 aa)
PETsPlastid-specific ribosomal protein-7, chloroplastic; [Elongation factor Ts, chloroplastic]: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP (By similarity). It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity). (953 aa)
IF2AH_ARATHEukaryotic translation initiation factor 2 subunit alpha homolog; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reactio [...] (344 aa)
PNP2Polyribonucleotide nucleotidyltransferase 2, mitochondrial; Involved in the 3'-end maturation of mitochondrial mRNAs, rRNAs and tRNAs. Functions as a poly(A) mRNA 3'-5' degrading phosphorylase and is required for the degradation of highly expressed transcripts of non-coding regions; Belongs to the polyribonucleotide nucleotidyltransferase family. (991 aa)
F10A5.14DNA-directed RNA polymerase. (196 aa)
RPS130S ribosomal protein S1, chloroplastic; Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs. Involved in cellular heat stress response and required for heat tolerance. Required for transcriptional activation of HSFA2 and its target genes in response to heat stress. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes. (416 aa)
F13K23.5Nucleic acid-binding, OB-fold-like protein. (767 aa)
Q94AW9_ARATHPNAS-3-like protein. (241 aa)
F16M19.22Transcription elongation factor SPT6-like; Transcription elongation factor that enhances the transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1322 aa)
EIF2AEukaryotic translation initiation factor 2 subunit alpha; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction cataly [...] (344 aa)
Q9LK47_ARATHNucleic acid-binding proteins superfamily. (392 aa)
PDE338Protein PIGMENT DEFECTIVE 338, chloroplastic; RNA-binding protein that acts as an RNA chaperone to remodel RNA structure and activates their translation. Required for seed pigmentation. Necessary for chloroplast development and subsequent photosynthetic electron flow, as well as for non-photochemical quenching (NPQ). Rubisco regulatory factor which regulates the concerted biogenesis of NDH, PSI (including PsaA, PsaB, PsaD, PsaF, PsaL, PsaG, PsaK and NdhH) and Cytb(6)f (including PetA, PetB, PetC and PetD) complexes. Binds specifically to and involved in the post-transcriptional regulat [...] (500 aa)
SPT6Transcription elongation factor SPT6 homolog; Transcription elongation factor that enhances the transcription elongation by RNA polymerase II (RNAPII) (By similarity). Plays an important role in regulating embryo apical and basal patterning during early embryogenesis, partly through negative regulation of the transcription factors PHABULOSA and PHAVOLUTA. Belongs to the SPT6 family. (1647 aa)
K15E6.10Nucleic acid-binding, OB-fold-like protein. (191 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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