STRINGSTRING
T5L23.10 T5L23.10 GLX2-1 GLX2-1 GLX2-2 GLX2-2 SNM1 SNM1 Q570G3_ARATH Q570G3_ARATH Q682P6_ARATH Q682P6_ARATH RNJ RNJ CPSF73-II CPSF73-II TRZ2 TRZ2 GLX2-4 GLX2-4 TRZ1 TRZ1 T16L1.30 T16L1.30 GLY3 GLY3 CPSF73-I CPSF73-I CPSF100 CPSF100 GLX2-5 GLX2-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T5L23.10Metallo-hydrolase/oxidoreductase superfamily protein. (318 aa)
GLX2-1Hydroxyacylglutathione hydrolase 1, mitochondrial; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (331 aa)
GLX2-2Hydroxyacylglutathione hydrolase cytoplasmic; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family. (258 aa)
SNM1DNA cross-link repair protein SNM1; May be required for repair of DNA lesions formed after exposure to oxidative stress. (484 aa)
Q570G3_ARATHMetallo-hydrolase/oxidoreductase superfamily protein. (361 aa)
Q682P6_ARATHMetallo-hydrolase/oxidoreductase superfamily protein. (524 aa)
RNJRibonuclease J; Essential protein required during embryogenesis, especially in initiating and maintaining the organization of shoot apical meristems (SAMs), cotyledons, and hypocotyls. Involved in auxin-mediated pathways during embryogenesis. RNase that has both endonuclease and 5'-3' exonuclease activities. Involved in RNA surveillance to prevent overaccumulation of antisense RNA. Probably involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay (By similarity). Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-li [...] (911 aa)
CPSF73-IICleavage and polyadenylation specificity factor subunit 3-II; Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. May function as mRNA 3'-end-processing endonuclease and also be involved in the histone 3'-end pre-mRNA processing. Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. INTS11 subfamily. (613 aa)
TRZ2tRNase Z TRZ2, chloroplastic; Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity. Involved in tRNA maturation, by removing a 3'- trailer from precursor tRNA. (354 aa)
GLX2-4Probable hydroxyacylglutathione hydrolase 2, chloroplastic; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family. (331 aa)
TRZ1tRNase Z TRZ1; Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity. Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA. Can use bis-(p-nitophenyl) phosphate (bpNPP) as substrate. Involved in the processing of small nucleolar RNAs (snoRNAs). (280 aa)
T16L1.30Metallo-beta-lactamase family protein. (355 aa)
GLY3Persulfide dioxygenase ETHE1 homolog, mitochondrial; Sulfur dioxygenase that plays an essential role in hydrogen sulfide catabolism in the mitochondrial matrix. Hydrogen sulfide (H(2)S) gives rise to cysteine persulfide residues. ETHE1 consumes molecular oxygen to catalyze the oxidation of the persulfide, once it has been transferred to a thiophilic acceptor, such as glutathione (R- SSH). Plays an important role in metabolic homeostasis in mitochondria by metabolizing hydrogen sulfide and preventing the accumulation of supraphysiological H(2)S levels that have toxic effects, due to the [...] (294 aa)
CPSF73-ICleavage and polyadenylation specificity factor subunit 3-I; Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. May function as mRNA 3'-end-processing endonuclease and also be involved in the histone 3'-end pre-mRNA processing. (693 aa)
CPSF100Cleavage and polyadenylation specificity factor subunit 2; CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition (By similarity). Required for antisense-RNA-mediated gene silencing. (739 aa)
GLX2-5Hydroxyacylglutathione hydrolase 2, mitochondrial; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (324 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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