STRINGSTRING
SEH54269.1 SEH54269.1 SEH54820.1 SEH54820.1 SEH54827.1 SEH54827.1 SEH54839.1 SEH54839.1 SEH54854.1 SEH54854.1 SEH92379.1 SEH92379.1 SEH92396.1 SEH92396.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEH54269.1Hypothetical protein. (462 aa)
SEH54820.1Uncharacterized conserved protein, DUF305 family; Manually curated. (200 aa)
SEH54827.1Hypothetical protein. (577 aa)
SEH54839.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (301 aa)
SEH54854.1AraC-type DNA-binding protein. (277 aa)
SEH92379.1Hypothetical protein. (115 aa)
SEH92396.1PE-PPE domain-containing protein. (339 aa)
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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