STRINGSTRING
BnaA05g13650D BnaA05g13650D BnaC03g54980D BnaC03g54980D BnaC08g44000D BnaC08g44000D BnaC04g29240D BnaC04g29240D BnaA03g51810D BnaA03g51810D BnaA09g05580D BnaA09g05580D BnaC05g02890D BnaC05g02890D BnaA06g20690D BnaA06g20690D BnaA01g33500D BnaA01g33500D BnaC08g43160D BnaC08g43160D BnaC05g40000D BnaC05g40000D BnaC05g34670D BnaC05g34670D BnaA01g19030D BnaA01g19030D BnaC01g40000D BnaC01g40000D BnaA09g51200D BnaA09g51200D BnaC08g46010D BnaC08g46010D BnaCnng09390D BnaCnng09390D BnaCnng09360D BnaCnng09360D BnaA06g22530D BnaA06g22530D BnaAnng06710D BnaAnng06710D BnaA05g25960D BnaA05g25960D BnaA05g25940D BnaA05g25940D BnaA05g25980D BnaA05g25980D BnaA05g20560D BnaA05g20560D BnaA06g16730D BnaA06g16730D BnaA06g16760D BnaA06g16760D BnaA09g09860D BnaA09g09860D BnaA06g00220D BnaA06g00220D BnaA01g26090D BnaA01g26090D BnaCnng23800D BnaCnng23800D BnaA09g55820D BnaA09g55820D BnaC05g51940D BnaC05g51940D BnaA09g53540D BnaA09g53540D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA05g13650DBnaA05g13650D protein. (197 aa)
BnaC03g54980DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (401 aa)
BnaC08g44000DBnaC08g44000D protein. (426 aa)
BnaC04g29240DBnaC04g29240D protein. (219 aa)
BnaA03g51810DBnaA03g51810D protein. (651 aa)
BnaA09g05580DBnaA09g05580D protein. (223 aa)
BnaC05g02890DBnaC05g02890D protein. (416 aa)
BnaA06g20690DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (401 aa)
BnaA01g33500DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (502 aa)
BnaC08g43160DBnaC08g43160D protein. (386 aa)
BnaC05g40000DBnaC05g40000D protein. (311 aa)
BnaC05g34670DBnaC05g34670D protein. (544 aa)
BnaA01g19030DBnaA01g19030D protein. (337 aa)
BnaC01g40000DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (502 aa)
BnaA09g51200DBnaA09g51200D protein. (326 aa)
BnaC08g46010DBnaC08g46010D protein. (331 aa)
BnaCnng09390DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (409 aa)
BnaCnng09360DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (406 aa)
BnaA06g22530DBnaA06g22530D protein. (570 aa)
BnaAnng06710DBnaAnng06710D protein. (517 aa)
BnaA05g25960DBnaA05g25960D protein. (177 aa)
BnaA05g25940DBnaA05g25940D protein. (313 aa)
BnaA05g25980DBnaA05g25980D protein. (177 aa)
BnaA05g20560DBnaA05g20560D protein. (744 aa)
BnaA06g16730DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (409 aa)
BnaA06g16760DHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (399 aa)
BnaA09g09860DBnaA09g09860D protein. (503 aa)
BnaA06g00220DBnaA06g00220D protein. (324 aa)
BnaA01g26090DBnaA01g26090D protein. (709 aa)
BnaCnng23800DBnaCnng23800D protein. (466 aa)
BnaA09g55820DBnaA09g55820D protein. (1343 aa)
BnaC05g51940DBnaC05g51940D protein. (151 aa)
BnaA09g53540DBnaA09g53540D protein. (1129 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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