STRINGSTRING
BnaC08g11700D BnaC08g11700D BnaC04g28650D BnaC04g28650D BnaC05g14020D BnaC05g14020D BnaC02g25850D BnaC02g25850D BnaA06g12420D BnaA06g12420D BnaA02g10830D BnaA02g10830D BnaC05g12400D BnaC05g12400D BnaA09g35020D BnaA09g35020D BnaC08g26250D BnaC08g26250D BnaA02g19260D BnaA02g19260D BnaC01g38430D BnaC01g38430D BnaA07g37840D BnaA07g37840D BnaA09g53360D BnaA09g53360D BnaCnng23600D BnaCnng23600D BnaAnng30290D BnaAnng30290D BnaCnng58300D BnaCnng58300D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC08g11700DBnaC08g11700D protein. (65 aa)
BnaC04g28650DBnaC04g28650D protein. (210 aa)
BnaC05g14020DBnaC05g14020D protein. (1382 aa)
BnaC02g25850DGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (419 aa)
BnaA06g12420DBnaA06g12420D protein. (1380 aa)
BnaA02g10830DBnaA02g10830D protein; Belongs to the GRAS family. (576 aa)
BnaC05g12400DGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (426 aa)
BnaA09g35020DBnaA09g35020D protein. (223 aa)
BnaC08g26250DBnaC08g26250D protein. (171 aa)
BnaA02g19260DPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (388 aa)
BnaC01g38430DBnaC01g38430D protein. (114 aa)
BnaA07g37840DBnaA07g37840D protein. (201 aa)
BnaA09g53360DBnaA09g53360D protein. (792 aa)
BnaCnng23600DPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (797 aa)
BnaAnng30290DBnaA05g34310D protein. (120 aa)
BnaCnng58300DBnaCnng58300D protein. (484 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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