STRINGSTRING
BnaA02g36040D BnaA02g36040D BnaA06g19360D BnaA06g19360D BnaC09g39060D BnaC09g39060D BnaC06g15120D BnaC06g15120D BnaA02g06710D BnaA02g06710D BnaC06g13330D BnaC06g13330D BnaC07g16510D BnaC07g16510D BnaA05g09320D BnaA05g09320D BnaC04g06100D BnaC04g06100D BnaA02g08440D BnaA02g08440D BnaA01g34120D BnaA01g34120D BnaA01g34100D BnaA01g34100D BnaA08g12830D BnaA08g12830D BnaA06g19340D BnaA06g19340D BnaCnng05530D BnaCnng05530D BnaAnng03500D BnaAnng03500D BnaC02g11990D BnaC02g11990D BnaA07g03280D BnaA07g03280D BnaA06g35530D BnaA06g35530D BnaC03g67840D BnaC03g67840D BnaC05g12790D BnaC05g12790D BnaA03g53340D BnaA03g53340D BnaAnng07090D BnaAnng07090D BnaA10g08390D BnaA10g08390D BnaA02g04740D BnaA02g04740D BnaA07g32060D BnaA07g32060D BnaA08g06680D BnaA08g06680D BnaA08g06730D BnaA08g06730D BnaA01g27990D BnaA01g27990D BnaA10g03220D BnaA10g03220D BnaA04g24640D BnaA04g24640D BnaA04g10710D BnaA04g10710D BnaA10g06440D BnaA10g06440D BnaA03g57870D BnaA03g57870D BnaAnng12530D BnaAnng12530D BnaC09g54460D BnaC09g54460D BnaUnng00880D BnaUnng00880D BnaC07g50200D BnaC07g50200D BnaAnng21810D BnaAnng21810D BnaCnng50660D BnaCnng50660D BnaAnng37960D BnaAnng37960D rps2 rps2 rpl20 rpl20 rpoA rpoA rpl14 rpl14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA02g36040DBnaA02g36040D protein; Belongs to the universal ribosomal protein uS13 family. (154 aa)
BnaA06g19360DBnaA01g34130D protein; Belongs to the universal ribosomal protein uL16 family. (82 aa)
BnaC09g39060DBnaC09g39060D protein. (58 aa)
BnaC06g15120DBnaC06g15120D protein; Belongs to the bacterial ribosomal protein bL17 family. (209 aa)
BnaA02g06710DBnaA02g06710D protein. (48 aa)
BnaC06g13330DBnaC06g13330D protein. (139 aa)
BnaC07g16510DBnaC07g16510D protein. (248 aa)
BnaA05g09320DBnaA05g09320D protein. (154 aa)
BnaC04g06100DBnaC03g22120D protein; Belongs to the universal ribosomal protein uL23 family. (154 aa)
BnaA02g08440DBnaA02g08440D protein. (136 aa)
BnaA01g34120DBnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family. (162 aa)
BnaA01g34100DBnaA01g34100D protein; Belongs to the universal ribosomal protein uS19 family. (266 aa)
BnaA08g12830DBnaA08g12830D protein. (167 aa)
BnaA06g19340DBnaA01g34110D protein; Belongs to the universal ribosomal protein uL22 family. (160 aa)
BnaCnng05530DBnaCnng05530D protein. (193 aa)
BnaAnng03500DBnaAnng03500D protein. (196 aa)
BnaC02g11990DBnaC02g11990D protein. (136 aa)
BnaA07g03280DBnaA07g03280D protein. (482 aa)
BnaA06g35530DBnaA06g35530D protein. (219 aa)
BnaC03g67840DBnaC03g67840D protein. (255 aa)
BnaC05g12790D50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (126 aa)
BnaA03g53340DBnaA03g53340D protein. (26 aa)
BnaAnng07090DBnaAnng07090D protein. (218 aa)
BnaA10g08390DBnaA10g08390D protein; Belongs to the universal ribosomal protein uL24 family. (199 aa)
BnaA02g04740DRibosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (134 aa)
BnaA07g32060D50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (143 aa)
BnaA08g06680DBnaA08g06680D protein. (40 aa)
BnaA08g06730DBnaA08g06730D protein; Belongs to the universal ribosomal protein uL11 family. (155 aa)
BnaA01g27990DBnaA01g27990D protein; Belongs to the universal ribosomal protein uL3 family. (314 aa)
BnaA10g03220DBnaA10g03220D protein; Belongs to the universal ribosomal protein uL6 family. (223 aa)
BnaA04g24640DBnaA04g24640D protein. (145 aa)
BnaA04g10710DBnaA04g10710D protein. (198 aa)
BnaA10g06440DBnaA10g06440D protein. (220 aa)
BnaA03g57870DBnaA03g57870D protein. (332 aa)
BnaAnng12530DRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (339 aa)
BnaC09g54460DBnaC09g54460D protein; Belongs to the universal ribosomal protein uS13 family. (169 aa)
BnaUnng00880DBnaUnng00880D protein. (149 aa)
BnaC07g50200DBnaC07g50200D protein; Belongs to the universal ribosomal protein uL5 family. (183 aa)
BnaAnng21810DBnaAnng21810D protein; Belongs to the universal ribosomal protein uL22 family. (275 aa)
BnaCnng50660DBnaCnng50660D protein; Belongs to the universal ribosomal protein uL3 family. (319 aa)
BnaAnng37960DBnaAnng37960D protein. (113 aa)
rps2BnaA01g34150D protein; Belongs to the universal ribosomal protein uS2 family. (236 aa)
rpl2050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (327 aa)
rpl14BnaA01g34140D protein; Belongs to the universal ribosomal protein uL14 family. (122 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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