16 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaA05g12180D	BnaA05g12180D protein. (388 aa)
	BnaC03g44210D	BnaC03g44210D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (565 aa)
	BnaA07g09030D	3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (321 aa)
	BnaC07g04330D	BnaC07g04330D protein. (368 aa)
	BnaA01g33800D	BnaA01g33800D protein. (245 aa)
	BnaA04g12710D	BnaA04g12710D protein. (223 aa)
	BnaA09g28100D	3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (320 aa)
	BnaA04g17370D	BnaA04g17370D protein. (367 aa)
	BnaC09g13240D	BnaC09g13240D protein. (404 aa)
	BnaA07g04370D	BnaA07g04370D protein. (369 aa)
	BnaA06g36060D	BnaA06g36060D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (469 aa)
	BnaA09g17930D	BnaA09g17930D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (470 aa)
	BnaA09g10550D	BnaA09g10550D protein. (273 aa)
	BnaA09g12890D	BnaA09g12890D protein. (404 aa)
	BnaC03g75820D	3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (328 aa)
	BnaC09g54150D	BnaC09g54150D protein. (257 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g33800D	BnaA04g12710D	A0A078G6W8	A0A078GK15	BnaA01g33800D protein.	BnaA04g12710D protein.	0.928
BnaA01g33800D	BnaA04g17370D	A0A078G6W8	A0A078GT97	BnaA01g33800D protein.	BnaA04g17370D protein.	0.974
BnaA01g33800D	BnaA05g12180D	A0A078G6W8	A0A078FF50	BnaA01g33800D protein.	BnaA05g12180D protein.	0.974
BnaA01g33800D	BnaA06g36060D	A0A078G6W8	A0A078H7Q2	BnaA01g33800D protein.	BnaA06g36060D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.776
BnaA01g33800D	BnaA07g04370D	A0A078G6W8	A0A078H7L1	BnaA01g33800D protein.	BnaA07g04370D protein.	0.956
BnaA01g33800D	BnaA07g09030D	A0A078G6W8	A0A078FSB3	BnaA01g33800D protein.	3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.934
BnaA01g33800D	BnaA09g10550D	A0A078G6W8	A0A078HSS7	BnaA01g33800D protein.	BnaA09g10550D protein.	0.919
BnaA01g33800D	BnaA09g12890D	A0A078G6W8	A0A078I7K7	BnaA01g33800D protein.	BnaA09g12890D protein.	0.919
BnaA01g33800D	BnaA09g17930D	A0A078G6W8	A0A078HBM8	BnaA01g33800D protein.	BnaA09g17930D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.776
BnaA01g33800D	BnaA09g28100D	A0A078G6W8	A0A078GR21	BnaA01g33800D protein.	3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.934
BnaA01g33800D	BnaC03g44210D	A0A078G6W8	A0A078FKT5	BnaA01g33800D protein.	BnaC03g44210D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.791
BnaA01g33800D	BnaC03g75820D	A0A078G6W8	A0A078IXD0	BnaA01g33800D protein.	3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.934
BnaA01g33800D	BnaC07g04330D	A0A078G6W8	A0A078FZ41	BnaA01g33800D protein.	BnaC07g04330D protein.	0.956
BnaA01g33800D	BnaC09g13240D	A0A078G6W8	A0A078GZB6	BnaA01g33800D protein.	BnaC09g13240D protein.	0.919
BnaA01g33800D	BnaC09g54150D	A0A078G6W8	A0A078IYE9	BnaA01g33800D protein.	BnaC09g54150D protein.	0.901
BnaA04g12710D	BnaA01g33800D	A0A078GK15	A0A078G6W8	BnaA04g12710D protein.	BnaA01g33800D protein.	0.928
BnaA04g12710D	BnaA04g17370D	A0A078GK15	A0A078GT97	BnaA04g12710D protein.	BnaA04g17370D protein.	0.955
BnaA04g12710D	BnaA05g12180D	A0A078GK15	A0A078FF50	BnaA04g12710D protein.	BnaA05g12180D protein.	0.955
BnaA04g12710D	BnaA06g36060D	A0A078GK15	A0A078H7Q2	BnaA04g12710D protein.	BnaA06g36060D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.937
BnaA04g12710D	BnaA07g04370D	A0A078GK15	A0A078H7L1	BnaA04g12710D protein.	BnaA07g04370D protein.	0.965