12 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaAnng23710D	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (131 aa)
	BnaC08g10290D	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (190 aa)
	BnaA05g27590D	BnaA05g27590D protein. (300 aa)
	BnaC03g65730D	BnaC03g65730D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	BnaA01g14400D	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (136 aa)
	BnaA09g15210D	BnaA09g15210D protein; Belongs to the membrane-bound acyltransferase family. (959 aa)
	BnaA03g53070D	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	BnaA08g07100D	BnaA08g07100D protein. (1124 aa)
	BnaC08g10730D	BnaC08g10730D protein. (131 aa)
	BnaCnng31290D	BnaCnng31290D protein. (297 aa)
	BnaAnng15370D	BnaAnng15370D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
	BnaCnng48170D	BnaCnng48170D protein. (1165 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g14400D	BnaA03g53070D	A0A078H9K3	A0A078HSG5	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.528
BnaA01g14400D	BnaA05g27590D	A0A078H9K3	A0A078F9T4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaA05g27590D protein.	0.492
BnaA01g14400D	BnaA08g07100D	A0A078H9K3	A0A078HT76	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaA08g07100D protein.	0.961
BnaA01g14400D	BnaA09g15210D	A0A078H9K3	A0A078HRP1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaA09g15210D protein; Belongs to the membrane-bound acyltransferase family.	0.974
BnaA01g14400D	BnaAnng15370D	A0A078H9K3	A0A078J0R3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaAnng15370D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.528
BnaA01g14400D	BnaC03g65730D	A0A078H9K3	A0A078FSJ2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaC03g65730D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.528
BnaA01g14400D	BnaC08g10730D	A0A078H9K3	A0A078HY86	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaC08g10730D protein.	0.769
BnaA01g14400D	BnaCnng31290D	A0A078H9K3	A0A078IY01	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaCnng31290D protein.	0.492
BnaA01g14400D	BnaCnng48170D	A0A078H9K3	A0A078JIS2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	BnaCnng48170D protein.	0.961
BnaA03g53070D	BnaA01g14400D	A0A078HSG5	A0A078H9K3	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.528
BnaA03g53070D	BnaA05g27590D	A0A078HSG5	A0A078F9T4	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	BnaA05g27590D protein.	0.934
BnaA03g53070D	BnaA08g07100D	A0A078HSG5	A0A078HT76	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	BnaA08g07100D protein.	0.914
BnaA03g53070D	BnaAnng23710D	A0A078HSG5	A0A078E790	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.528
BnaA03g53070D	BnaC08g10290D	A0A078HSG5	A0A078F3J7	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.528
BnaA03g53070D	BnaCnng31290D	A0A078HSG5	A0A078IY01	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	BnaCnng31290D protein.	0.934
BnaA03g53070D	BnaCnng48170D	A0A078HSG5	A0A078JIS2	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	BnaCnng48170D protein.	0.914
BnaA05g27590D	BnaA01g14400D	A0A078F9T4	A0A078H9K3	BnaA05g27590D protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.492
BnaA05g27590D	BnaA03g53070D	A0A078F9T4	A0A078HSG5	BnaA05g27590D protein.	BnaA03g53070D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.934
BnaA05g27590D	BnaA08g07100D	A0A078F9T4	A0A078HT76	BnaA05g27590D protein.	BnaA08g07100D protein.	0.936
BnaA05g27590D	BnaAnng15370D	A0A078F9T4	A0A078J0R3	BnaA05g27590D protein.	BnaAnng15370D protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.934