STRINGSTRING
BnaA05g28310D BnaA05g28310D BnaC05g04630D BnaC05g04630D BnaA03g01910D BnaA03g01910D BnaC03g57850D BnaC03g57850D BnaA09g07860D BnaA09g07860D BnaA09g03590D BnaA09g03590D BnaA05g30840D BnaA05g30840D BnaA05g19390D BnaA05g19390D BnaC09g42110D BnaC09g42110D BnaA02g10840D BnaA02g10840D BnaC04g50790D BnaC04g50790D BnaC09g09250D BnaC09g09250D BnaC09g37610D BnaC09g37610D BnaC09g21750D BnaC09g21750D BnaA09g38450D BnaA09g38450D BnaC02g01110D BnaC02g01110D BnaAnng09370D BnaAnng09370D BnaCnng17640D BnaCnng17640D BnaCnng23670D BnaCnng23670D BnaC09g52780D BnaC09g52780D BnaA02g35820D BnaA02g35820D BnaA09g53020D BnaA09g53020D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA05g28310DBnaA05g28310D protein. (547 aa)
BnaC05g04630DBnaC05g04630D protein. (1162 aa)
BnaA03g01910DBnaA03g01910D protein. (533 aa)
BnaC03g57850DBnaC03g57850D protein. (793 aa)
BnaA09g07860DU3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (531 aa)
BnaA09g03590DBnaA09g03590D protein. (535 aa)
BnaA05g30840DBnaA05g30840D protein. (2200 aa)
BnaA05g19390DBnaA05g19390D protein. (1024 aa)
BnaC09g42110DBnaC09g42110D protein. (99 aa)
BnaA02g10840DBnaA02g10840D protein. (291 aa)
BnaC04g50790DBnaC04g50790D protein. (223 aa)
BnaC09g09250DBnaC09g09250D protein. (591 aa)
BnaC09g37610DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (178 aa)
BnaC09g21750DBnaC09g21750D protein. (372 aa)
BnaA09g38450DU3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (228 aa)
BnaC02g01110DKRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
BnaAnng09370DBnaAnng09370D protein. (1205 aa)
BnaCnng17640DBnaCnng17640D protein. (800 aa)
BnaCnng23670DBnaCnng23670D protein. (323 aa)
BnaC09g52780DBnaC09g52780D protein. (474 aa)
BnaA02g35820DBnaA02g35820D protein. (892 aa)
BnaA09g53020DBnaA09g53020D protein. (298 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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