STRINGSTRING
BnaC03g27460D BnaC03g27460D BnaC04g49590D BnaC04g49590D BnaC08g10510D BnaC08g10510D BnaC05g49680D BnaC05g49680D BnaAnng38410D BnaAnng38410D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC03g27460DAT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). (245 aa)
BnaC04g49590DBnaC04g49590D protein. (247 aa)
BnaC08g10510DBnaC08g10510D protein. (227 aa)
BnaC05g49680DBnaC05g49680D protein. (275 aa)
BnaAnng38410DBnaAnng38410D protein. (189 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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