STRINGSTRING
BnaC05g52050D BnaC05g52050D BnaA06g24940D BnaA06g24940D BnaA02g06780D BnaA02g06780D BnaC07g33650D BnaC07g33650D BnaA09g39520D BnaA09g39520D BnaC03g57650D BnaC03g57650D BnaC04g48420D BnaC04g48420D BnaA09g43130D BnaA09g43130D BnaA09g20230D BnaA09g20230D BnaC09g30900D BnaC09g30900D BnaA09g05390D BnaA09g05390D BnaA04g21850D BnaA04g21850D BnaA09g47750D BnaA09g47750D BnaAnng34260D BnaAnng34260D DHN1 DHN1 ERD10 ERD10 cor14 cor14 BnaA03g56750D BnaA03g56750D BnaA09g07280D BnaA09g07280D BnaC04g36360D BnaC04g36360D BnaA09g44310D BnaA09g44310D BnaC08g14540D BnaC08g14540D BnaA08g25140D BnaA08g25140D BnaA08g25580D BnaA08g25580D BnaA01g18270D BnaA01g18270D BnaC01g29740D BnaC01g29740D BnaA05g19380D BnaA05g19380D BnaA06g13360D BnaA06g13360D BnaA06g12890D BnaA06g12890D BnaC04g51620D BnaC04g51620D BnaCnng05940D BnaCnng05940D BnaA02g09550D BnaA02g09550D BnaA06g14910D BnaA06g14910D BnaC05g21930D BnaC05g21930D BnaA08g26790D BnaA08g26790D BnaC07g15380D BnaC07g15380D BnaA09g27210D BnaA09g27210D BnaC01g37220D BnaC01g37220D BnaC01g21680D BnaC01g21680D BnaC08g19670D BnaC08g19670D BnaA09g41330D BnaA09g41330D BnaC02g09710D BnaC02g09710D BnaC03g23750D BnaC03g23750D BnaA03g56650D BnaA03g56650D ZF1 ZF1 BnaAnng38960D BnaAnng38960D BnaAnng35110D BnaAnng35110D BnaA08g30200D BnaA08g30200D BnaAnng25950D BnaAnng25950D BnaAnng29030D BnaAnng29030D BnaAnng26260D BnaAnng26260D BnaA04g27520D BnaA04g27520D BnaA02g36030D BnaA02g36030D BnaCnng50130D BnaCnng50130D BnaC08g49610D BnaC08g49610D BnaA02g06790D BnaA02g06790D BnaCnng48790D BnaCnng48790D BnaCnng51220D BnaCnng51220D BnaC02g45160D BnaC02g45160D BnaC05g50160D BnaC05g50160D BnaAnng22550D BnaAnng22550D BnaCnng43480D BnaCnng43480D BnaC03g71900D BnaC03g71900D BnaCnng49280D BnaCnng49280D BnaCnng42010D BnaCnng42010D BnaA03g56740D BnaA03g56740D BnaC08g49480D BnaC08g49480D BnaCnng37450D BnaCnng37450D BnaCnng29550D BnaCnng29550D BnaA02g34800D BnaA02g34800D BnaCnng29570D BnaCnng29570D BnaCnng27850D BnaCnng27850D BnaA08g30910D BnaA08g30910D BnaCnng20790D BnaCnng20790D BnaCnng24070D BnaCnng24070D BnaAnng10600D BnaAnng10600D BnaA08g30950D BnaA08g30950D BnaA05g33350D BnaA05g33350D BnaA09g03370D BnaA09g03370D BnaA07g03740D BnaA07g03740D BnaA04g26770D BnaA04g26770D BnaAnng08360D BnaAnng08360D BnaA09g26860D BnaA09g26860D BnaA04g24580D BnaA04g24580D BnaAnng08450D BnaAnng08450D BnaA02g32940D BnaA02g32940D BnaA02g17050D BnaA02g17050D BnaA07g31890D BnaA07g31890D BnaC02g42210D BnaC02g42210D BnaC02g35130D BnaC02g35130D BnaA04g14430D BnaA04g14430D BnaC03g14510D BnaC03g14510D BnaA03g11800D BnaA03g11800D BnaC08g10700D BnaC08g10700D BnaA01g07170D BnaA01g07170D BnaC01g22200D BnaC01g22200D BnaA10g08400D BnaA10g08400D BnaC01g00240D BnaC01g00240D BnaA01g05360D BnaA01g05360D BnaA01g05380D BnaA01g05380D BnaC01g00220D BnaC01g00220D BnaC05g47070D BnaC05g47070D BnaC02g13690D BnaC02g13690D BnaC04g00610D BnaC04g00610D BnaC05g14920D BnaC05g14920D BnaC08g26510D BnaC08g26510D BnaA09g35210D BnaA09g35210D BnaA01g29600D BnaA01g29600D BnaCnng08220D BnaCnng08220D BnaA06g17080D BnaA06g17080D BnaA07g02430D BnaA07g02430D BnaC03g58740D BnaC03g58740D BnaC03g48640D BnaC03g48640D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC05g52050DU6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
BnaA06g24940DBnaA06g24940D protein. (153 aa)
BnaA02g06780DBnaA02g06780D protein. (157 aa)
BnaC07g33650DTranscriptional adapter. (469 aa)
BnaA09g39520DBnaA09g39520D protein. (279 aa)
BnaC03g57650DBnaC03g57650D protein. (177 aa)
BnaC04g48420DBnaC04g48420D protein. (632 aa)
BnaA09g43130DBnaA09g43130D protein. (344 aa)
BnaA09g20230DBnaA09g20230D protein. (151 aa)
BnaC09g30900DBnaC09g30900D protein. (433 aa)
BnaA09g05390DBnaA09g05390D protein. (154 aa)
BnaA04g21850DVacuolar cation/proton exchanger; Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (465 aa)
BnaA09g47750DBnaA09g47750D protein. (1380 aa)
BnaAnng34260DDehydration responsive element binding protein. (214 aa)
DHN1BnaA09g43150D protein; Belongs to the plant dehydrin family. (183 aa)
ERD10BnaC05g15780D protein; Belongs to the plant dehydrin family. (271 aa)
cor14Cold-regulated protein. (129 aa)
BnaA03g56750DLow-temperature-regulated transcript protein. (142 aa)
BnaA09g07280DBnaA09g07280D protein. (154 aa)
BnaC04g36360DBnaC04g36360D protein. (399 aa)
BnaA09g44310DU6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
BnaC08g14540DBnaC08g14540D protein. (1374 aa)
BnaA08g25140DBnaA08g25140D protein. (148 aa)
BnaA08g25580DBnaA08g25580D protein. (1372 aa)
BnaA01g18270DBnaA01g18270D protein. (99 aa)
BnaC01g29740DBnaC01g29740D protein. (82 aa)
BnaA05g19380DBnaA05g19380D protein. (108 aa)
BnaA06g13360DBnaA06g13360D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (515 aa)
BnaA06g12890DBnaA06g12890D protein. (380 aa)
BnaC04g51620DBnaC04g51620D protein. (310 aa)
BnaCnng05940DBnaCnng05940D protein. (105 aa)
BnaA02g09550DBnaA02g09550D protein. (106 aa)
BnaA06g14910DBnaA06g14910D protein. (398 aa)
BnaC05g21930DBnaC05g21930D protein. (483 aa)
BnaA08g26790DPrefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (131 aa)
BnaC07g15380DBnaC07g15380D protein; Belongs to the plant dehydrin family. (216 aa)
BnaA09g27210DBnaA09g27210D protein. (475 aa)
BnaC01g37220DU6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
BnaC01g21680DBnaC01g21680D protein. (152 aa)
BnaC08g19670DBnaC08g19670D protein. (417 aa)
BnaA09g41330DBnaA09g41330D protein. (400 aa)
BnaC02g09710DBnaC02g09710D protein. (158 aa)
BnaC03g23750DLow-temperature-regulated transcript protein. (142 aa)
BnaA03g56650DLow-temperature-regulated transcript protein. (135 aa)
ZF1C2H2-type zinc finger protein. (160 aa)
BnaAnng38960DBnaAnng38960D protein. (86 aa)
BnaAnng35110DBnaAnng35110D protein. (111 aa)
BnaA08g30200DTranscriptional adapter. (486 aa)
BnaAnng25950DBnaAnng25950D protein. (209 aa)
BnaAnng29030DBnaAnng29030D protein. (194 aa)
BnaAnng26260DBnaAnng26260D protein. (189 aa)
BnaA04g27520DBnaA04g27520D protein. (320 aa)
BnaA02g36030DBnaA02g36030D protein. (194 aa)
BnaCnng50130DPrefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (156 aa)
BnaC08g49610DBnaC08g49610D protein. (1380 aa)
BnaA02g06790DZinc finger protein 12. (160 aa)
BnaCnng48790DBnaCnng48790D protein. (357 aa)
BnaCnng51220DBnaCnng51220D protein. (96 aa)
BnaC02g45160DBnaC02g45160D protein; Belongs to the plant dehydrin family. (189 aa)
BnaC05g50160DBnaC05g50160D protein. (381 aa)
BnaAnng22550DBnaAnng22550D protein. (382 aa)
BnaCnng43480DBnaCnng43480D protein. (84 aa)
BnaC03g71900DBnaC03g71900D protein. (214 aa)
BnaCnng49280DBnaCnng49280D protein. (191 aa)
BnaCnng42010DBnaCnng42010D protein. (219 aa)
BnaA03g56740DBnaA03g56740D protein. (135 aa)
BnaC08g49480DBnaC08g49480D protein. (381 aa)
BnaCnng37450DBnaCnng37450D protein. (197 aa)
BnaCnng29550DBnaCnng29550D protein. (323 aa)
BnaA02g34800DBnaA02g34800D protein; Belongs to the plant dehydrin family. (190 aa)
BnaCnng29570DBnaCnng29570D protein. (334 aa)
BnaCnng27850DBnaA09g07980D protein; Belongs to the plant dehydrin family. (144 aa)
BnaA08g30910DBnaA08g30910D protein. (217 aa)
BnaCnng20790DBnaCnng20790D protein. (245 aa)
BnaCnng24070DBnaCnng24070D protein. (151 aa)
BnaAnng10600DMediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1655 aa)
BnaA08g30950DBnaA08g30950D protein. (221 aa)
BnaA05g33350DBnaA05g33350D protein. (81 aa)
BnaA09g03370DPrefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (196 aa)
BnaA07g03740DBnaA07g03740D protein. (197 aa)
BnaA04g26770DBnaA04g26770D protein. (318 aa)
BnaAnng08360DBnaAnng08360D protein. (235 aa)
BnaA09g26860DBnaA09g26860D protein. (227 aa)
BnaA04g24580DBnaA04g24580D protein. (467 aa)
BnaAnng08450DBnaAnng08450D protein. (161 aa)
BnaA02g32940DBnaA02g32940D protein. (96 aa)
BnaA02g17050DBnaA02g17050D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (487 aa)
BnaA07g31890DBnaA07g31890D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (536 aa)
BnaC02g42210DBnaC02g42210D protein. (151 aa)
BnaC02g35130DBnaC02g35130D protein. (192 aa)
BnaA04g14430DBnaA04g14430D protein. (399 aa)
BnaC03g14510DBnaC03g14510D protein. (436 aa)
BnaA03g11800DBnaA03g11800D protein. (437 aa)
BnaC08g10700DTranscriptional adapter. (486 aa)
BnaA01g07170DBnaA01g07170D protein; Belongs to the protein kinase superfamily. (364 aa)
BnaC01g22200DBnaC01g22200D protein. (99 aa)
BnaA10g08400DBnaA10g08400D protein. (433 aa)
BnaC01g00240DBnaC01g00240D protein. (344 aa)
BnaA01g05360DBnaA01g05360D protein. (149 aa)
BnaA01g05380DBnaA01g05380D protein. (344 aa)
BnaC01g00220DBnaC01g00220D protein. (149 aa)
BnaC05g47070DMediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1680 aa)
BnaC02g13690DBnaC02g13690D protein; Belongs to the peroxidase family. (402 aa)
BnaC04g00610DBnaC04g00610D protein. (312 aa)
BnaC05g14920DBnaC05g14920D protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (520 aa)
BnaC08g26510DBnaC08g26510D protein. (480 aa)
BnaA09g35210DBnaA09g35210D protein. (476 aa)
BnaA01g29600DU6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
BnaCnng08220D3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (431 aa)
BnaA06g17080DBnaA06g17080D protein. (154 aa)
BnaA07g02430DBnaA07g02430D protein. (244 aa)
BnaC03g58740DBnaC03g58740D protein. (458 aa)
BnaC03g48640DBnaC03g48640D protein. (150 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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