STRINGSTRING
BnaA01g24820D BnaA01g24820D BnaA05g17410D BnaA05g17410D BnaA05g17430D BnaA05g17430D BnaA09g06820D BnaA09g06820D BnaC02g40020D BnaC02g40020D BnaC05g30410D BnaC05g30410D BnaA01g27800D BnaA01g27800D BnaC01g34640D BnaC01g34640D BnaCnng24660D BnaCnng24660D BnaCnng33690D BnaCnng33690D BnaAnng15120D BnaAnng15120D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA01g24820DGamma-aminobutyric acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (506 aa)
BnaA05g17410DBnaA05g17410D protein. (236 aa)
BnaA05g17430DGamma-aminobutyric acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)
BnaA09g06820DBnaA09g06820D protein. (408 aa)
BnaC02g40020DBnaC02g40020D protein. (324 aa)
BnaC05g30410DGamma-aminobutyric acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)
BnaA01g27800DBnaA01g27800D protein. (424 aa)
BnaC01g34640DBnaC01g34640D protein. (424 aa)
BnaCnng24660DBnaCnng24660D protein. (177 aa)
BnaCnng33690DBnaCnng33690D protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (498 aa)
BnaAnng15120DBnaAnng15120D protein. (408 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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