STRINGSTRING
BnaA06g03100D BnaA06g03100D BnaA09g16630D BnaA09g16630D BnaCnng55890D BnaCnng55890D BnaAnng15380D BnaAnng15380D BnaCnng26130D BnaCnng26130D BnaC03g60190D BnaC03g60190D BnaA02g22360D BnaA02g22360D BnaA10g07100D BnaA10g07100D BnaC02g20260D BnaC02g20260D BnaA01g19100D BnaA01g19100D BnaCnng19740D BnaCnng19740D BnaC03g65740D BnaC03g65740D BnaAnng29390D BnaAnng29390D BnaCnng67980D BnaCnng67980D BnaA07g04420D BnaA07g04420D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA06g03100DBnaA06g03100D protein. (418 aa)
BnaA09g16630D1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (180 aa)
BnaCnng55890DProbable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily. (539 aa)
BnaAnng15380DBnaAnng15380D protein. (266 aa)
BnaCnng26130DBnaCnng26130D protein. (418 aa)
BnaC03g60190DBnaC03g60190D protein. (274 aa)
BnaA02g22360D1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (259 aa)
BnaA10g07100DProbable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily. (535 aa)
BnaC02g20260DBnaC02g20260D protein. (89 aa)
BnaA01g19100D1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (195 aa)
BnaCnng19740D1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (180 aa)
BnaC03g65740DBnaC03g65740D protein. (266 aa)
BnaAnng29390DBnaAnng29390D protein. (322 aa)
BnaCnng67980DMethylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily. (373 aa)
BnaA07g04420DMethylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily. (373 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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