STRINGSTRING
BnaA08g13850D BnaA08g13850D BnaC09g12750D BnaC09g12750D BnaC03g34790D BnaC03g34790D BnaA05g26350D BnaA05g26350D BnaC08g44910D BnaC08g44910D BnaC05g04630D BnaC05g04630D BnaC03g71040D BnaC03g71040D BnaA07g08420D BnaA07g08420D BnaC09g41090D BnaC09g41090D BnaA09g03590D BnaA09g03590D BnaC03g30140D BnaC03g30140D BnaC05g26360D BnaC05g26360D BnaA01g33870D BnaA01g33870D BnaA01g18480D BnaA01g18480D BnaC09g47740D BnaC09g47740D BnaA05g30840D BnaA05g30840D BnaC05g40110D BnaC05g40110D BnaC09g39670D BnaC09g39670D BnaC09g42110D BnaC09g42110D BnaC06g02860D BnaC06g02860D BnaC09g42100D BnaC09g42100D BnaA02g10840D BnaA02g10840D BnaC09g28460D BnaC09g28460D BnaC01g40380D BnaC01g40380D BnaC06g26660D BnaC06g26660D BnaA07g00340D BnaA07g00340D BnaC03g15740D BnaC03g15740D BnaC02g06840D BnaC02g06840D BnaC09g21750D BnaC09g21750D BnaA09g10290D BnaA09g10290D BnaA03g12910D BnaA03g12910D BnaC05g11270D BnaC05g11270D BnaAnng06240D BnaAnng06240D BnaA08g00080D BnaA08g00080D BnaC09g22300D BnaC09g22300D BnaC02g01270D BnaC02g01270D BnaA02g29790D BnaA02g29790D BnaA08g02260D BnaA08g02260D BnaC03g44910D BnaC03g44910D BnaCnng19440D BnaCnng19440D BnaA09g25200D BnaA09g25200D BnaA03g06930D BnaA03g06930D BnaA03g47570D BnaA03g47570D BnaA06g37570D BnaA06g37570D BnaA06g37580D BnaA06g37580D BnaC02g39570D BnaC02g39570D BnaA08g31010D BnaA08g31010D BnaCnng23040D BnaCnng23040D BnaAnng11410D BnaAnng11410D BnaCnng23670D BnaCnng23670D BnaA02g04000D BnaA02g04000D BnaCnng27820D BnaCnng27820D BnaCnng32770D BnaCnng32770D BnaC03g73340D BnaC03g73340D BnaCnng34340D BnaCnng34340D BnaC01g41630D BnaC01g41630D BnaA05g35890D BnaA05g35890D BnaCnng38670D BnaCnng38670D BnaAnng18930D BnaAnng18930D BnaCnng38680D BnaCnng38680D BnaCnng40350D BnaCnng40350D BnaA03g57210D BnaA03g57210D BnaCnng40370D BnaCnng40370D BnaA09g56020D BnaA09g56020D BnaA02g35820D BnaA02g35820D BnaC02g48350D BnaC02g48350D BnaAnng25500D BnaAnng25500D BnaA09g53020D BnaA09g53020D BnaCnng73320D BnaCnng73320D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA08g13850DBnaA08g13850D protein. (644 aa)
BnaC09g12750DBnaC09g12750D protein. (294 aa)
BnaC03g34790DBnaC03g34790D protein. (2202 aa)
BnaA05g26350DBnaA05g26350D protein. (177 aa)
BnaC08g44910DBnaC08g44910D protein. (1187 aa)
BnaC05g04630DBnaC05g04630D protein. (1162 aa)
BnaC03g71040DBnaC03g71040D protein. (513 aa)
BnaA07g08420DBnaA07g08420D protein. (185 aa)
BnaC09g41090DBnaC09g41090D protein. (877 aa)
BnaA09g03590DBnaA09g03590D protein. (535 aa)
BnaC03g30140DBnaC03g30140D protein. (484 aa)
BnaC05g26360DBnaC05g26360D protein. (768 aa)
BnaA01g33870DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (203 aa)
BnaA01g18480DBnaA01g18480D protein. (931 aa)
BnaC09g47740DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
BnaA05g30840DBnaA05g30840D protein. (2200 aa)
BnaC05g40110DBnaC05g40110D protein. (143 aa)
BnaC09g39670DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (140 aa)
BnaC09g42110DBnaC09g42110D protein. (99 aa)
BnaC06g02860DBnaC06g02860D protein. (770 aa)
BnaC09g42100DBnaC09g42100D protein. (40 aa)
BnaA02g10840DBnaA02g10840D protein. (291 aa)
BnaC09g28460DBnaC09g28460D protein. (201 aa)
BnaC01g40380DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (202 aa)
BnaC06g26660DBnaC06g26660D protein. (302 aa)
BnaA07g00340DBnaA07g00340D protein. (64 aa)
BnaC03g15740DBnaC03g15740D protein. (453 aa)
BnaC02g06840DBnaC02g06840D protein. (868 aa)
BnaC09g21750DBnaC09g21750D protein. (372 aa)
BnaA09g10290DBnaA09g10290D protein. (64 aa)
BnaA03g12910DBnaA03g12910D protein. (438 aa)
BnaC05g11270DBnaC05g11270D protein. (73 aa)
BnaAnng06240DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
BnaA08g00080DBnaA08g00080D protein. (519 aa)
BnaC09g22300DBnaC09g22300D protein. (93 aa)
BnaC02g01270DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
BnaA02g29790DBnaA02g29790D protein. (445 aa)
BnaA08g02260DBnaA08g02260D protein. (195 aa)
BnaC03g44910DBnaC03g44910D protein. (124 aa)
BnaCnng19440DBnaCnng19440D protein. (449 aa)
BnaA09g25200DBnaA09g25200D protein. (428 aa)
BnaA03g06930DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (199 aa)
BnaA03g47570DBnaA03g47570D protein. (313 aa)
BnaA06g37570DBnaA06g37570D protein. (142 aa)
BnaA06g37580DBnaA06g37580D protein. (641 aa)
BnaC02g39570DBnaC02g39570D protein. (525 aa)
BnaA08g31010DBnaA08g31010D protein. (322 aa)
BnaCnng23040DBnaCnng23040D protein. (117 aa)
BnaAnng11410DBnaAnng11410D protein. (531 aa)
BnaCnng23670DBnaCnng23670D protein. (323 aa)
BnaA02g04000DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (194 aa)
BnaCnng27820DBnaCnng27820D protein. (931 aa)
BnaCnng32770DBnaCnng32770D protein. (451 aa)
BnaC03g73340DBnaC03g73340D protein. (505 aa)
BnaCnng34340DBnaCnng34340D protein. (515 aa)
BnaC01g41630DBnaC01g41630D protein. (428 aa)
BnaA05g35890DBnaA05g35890D protein. (769 aa)
BnaCnng38670DBnaCnng38670D protein. (105 aa)
BnaAnng18930DBnaAnng18930D protein. (521 aa)
BnaCnng38680DBnaCnng38680D protein. (182 aa)
BnaCnng40350DBnaCnng40350D protein. (688 aa)
BnaA03g57210DBnaA03g57210D protein. (485 aa)
BnaCnng40370DBnaCnng40370D protein. (103 aa)
BnaA09g56020DBnaA09g43720D protein. (64 aa)
BnaA02g35820DBnaA02g35820D protein. (892 aa)
BnaC02g48350DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (150 aa)
BnaAnng25500DBnaAnng25500D protein. (107 aa)
BnaA09g53020DBnaA09g53020D protein. (298 aa)
BnaCnng73320DBnaCnng73320D protein. (158 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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