118 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaC09g41680D	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (190 aa)
	BnaA05g28310D	BnaA05g28310D protein. (547 aa)
	BnaC09g12750D	BnaC09g12750D protein. (294 aa)
	BnaC03g34790D	BnaC03g34790D protein. (2202 aa)
	BnaA05g26350D	BnaA05g26350D protein. (177 aa)
	BnaA05g27100D	BnaA05g27100D protein. (1904 aa)
	BnaC03g71040D	BnaC03g71040D protein. (513 aa)
	BnaC08g45120D	BnaC08g45120D protein. (430 aa)
	BnaC03g57830D	BnaC03g57830D protein. (215 aa)
	BnaC03g57820D	BnaC03g57820D protein. (91 aa)
	BnaC03g57720D	BnaC03g57720D protein. (91 aa)
	BnaC02g02270D	BnaC02g02270D protein. (130 aa)
	BnaC05g19770D	BnaC05g19770D protein. (738 aa)
	BnaA03g51220D	BnaA03g51220D protein. (2578 aa)
	BnaC07g03320D	BnaC07g03320D protein. (61 aa)
	BnaA08g13850D	BnaA08g13850D protein. (644 aa)
	BnaA09g29440D	BnaA09g29440D protein. (962 aa)
	BnaC05g19760D	BnaC05g19760D protein. (553 aa)
	BnaC05g19750D	BnaC05g19750D protein. (240 aa)
	BnaC05g19900D	BnaC05g19900D protein. (268 aa)
	BnaA09g29450D	BnaA09g29450D protein. (1257 aa)
	BnaA09g29430D	BnaA09g29430D protein. (651 aa)
	BnaC09g41090D	BnaC09g41090D protein. (877 aa)
	BnaA05g09270D	BnaA05g09270D protein. (257 aa)
	BnaA09g07860D	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (531 aa)
	BnaA09g03590D	BnaA09g03590D protein. (535 aa)
	BnaC03g30140D	BnaC03g30140D protein. (484 aa)
	BnaC03g30050D	BnaC03g30050D protein. (911 aa)
	BnaA01g18480D	BnaA01g18480D protein. (931 aa)
	BnaC09g47550D	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (385 aa)
	BnaC04g49130D	BnaC04g49130D protein. (264 aa)
	BnaA09g00760D	BnaA09g00760D protein. (769 aa)
	BnaC04g49140D	BnaC04g49140D protein. (135 aa)
	BnaC04g49170D	BnaC04g49170D protein. (120 aa)
	BnaA05g30840D	BnaA05g30840D protein. (2200 aa)
	BnaC04g49150D	BnaC04g49150D protein. (194 aa)
	BnaC04g49160D	BnaC04g49160D protein. (134 aa)
	BnaA05g19390D	BnaA05g19390D protein. (1024 aa)
	BnaA07g02510D	BnaA07g02510D protein. (580 aa)
	BnaC05g40110D	BnaC05g40110D protein. (143 aa)
	BnaA08g15320D	BnaA08g15320D protein. (1049 aa)
	BnaC09g28420D	BnaC09g28420D protein. (51 aa)
	BnaC09g42110D	BnaC09g42110D protein. (99 aa)
	BnaC09g42100D	BnaC09g42100D protein. (40 aa)
	BnaA02g10840D	BnaA02g10840D protein. (291 aa)
	BnaC04g50790D	BnaC04g50790D protein. (223 aa)
	BnaC09g09250D	BnaC09g09250D protein. (591 aa)
	BnaC09g28460D	BnaC09g28460D protein. (201 aa)
	BnaA04g25310D	BnaA04g25310D protein. (135 aa)
	BnaC06g26660D	BnaC06g26660D protein. (302 aa)
	BnaA03g49270D	BnaA03g49270D protein. (453 aa)
	BnaA04g25270D	BnaA04g25270D protein. (227 aa)
	BnaA04g25300D	BnaA04g25300D protein. (134 aa)
	BnaC07g16690D	BnaC07g16690D protein. (261 aa)
	BnaA04g25290D	BnaA04g25290D protein. (228 aa)
	BnaC03g15740D	BnaC03g15740D protein. (453 aa)
	BnaC02g26240D	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	BnaA01g32880D	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (142 aa)
	BnaC09g37610D	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (178 aa)
	BnaA06g10160D	BnaA06g10160D protein. (1571 aa)
	BnaC02g06840D	BnaC02g06840D protein. (868 aa)
	BnaC09g21750D	BnaC09g21750D protein. (372 aa)
	BnaA03g12910D	BnaA03g12910D protein. (438 aa)
	BnaAnng06080D	BnaAnng06080D protein. (88 aa)
	BnaA09g38450D	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (228 aa)
	BnaC05g11770D	BnaC05g11770D protein. (920 aa)
	BnaAnng06090D	BnaAnng06090D protein. (286 aa)
	BnaC04g00990D	BnaC04g00990D protein. (206 aa)
	BnaA01g31610D	BnaA01g31610D protein. (536 aa)
	BnaA08g00080D	BnaA08g00080D protein. (519 aa)
	BnaC05g48210D	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	BnaC03g24380D	BnaC03g24380D protein. (671 aa)
	BnaC02g01110D	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
	BnaC07g15550D	BnaC07g15550D protein. (44 aa)
	BnaA07g12530D	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (528 aa)
	BnaA02g29790D	BnaA02g29790D protein. (445 aa)
	BnaA08g02260D	BnaA08g02260D protein. (195 aa)
	BnaA09g08990D	BnaA09g08990D protein. (583 aa)
	BnaA09g09040D	BnaA09g09040D protein. (200 aa)
	BnaAnng09370D	BnaAnng09370D protein. (1205 aa)
	BnaAnng09360D	BnaAnng09360D protein. (1402 aa)
	BnaC03g44910D	BnaC03g44910D protein. (124 aa)
	BnaA03g47570D	BnaA03g47570D protein. (313 aa)
	BnaCnng19210D	BnaCnng19210D protein. (606 aa)
	BnaC02g39570D	BnaC02g39570D protein. (525 aa)
	BnaA08g31010D	BnaA08g31010D protein. (322 aa)
	BnaCnng22750D	BnaCnng22750D protein. (713 aa)
	BnaCnng23040D	BnaCnng23040D protein. (117 aa)
	BnaAnng11410D	BnaAnng11410D protein. (531 aa)
	BnaC01g41990D	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	BnaC03g76710D	BnaC03g76710D protein. (1049 aa)
	BnaCnng23670D	BnaCnng23670D protein. (323 aa)
	BnaCnng27820D	BnaCnng27820D protein. (931 aa)
	BnaA02g36530D	BnaA02g36530D protein. (840 aa)
	BnaA04g27370D	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (228 aa)
	BnaC06g42660D	BnaC06g42660D protein. (708 aa)
	BnaA05g33460D	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (208 aa)
	BnaCnng32770D	BnaCnng32770D protein. (451 aa)
	BnaC03g73340D	BnaC03g73340D protein. (505 aa)
	BnaC04g55100D	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (228 aa)
	BnaCnng34340D	BnaCnng34340D protein. (515 aa)
	BnaC01g41630D	BnaC01g41630D protein. (428 aa)
	BnaAnng16020D	BnaAnng16020D protein. (98 aa)
	BnaC09g52780D	BnaC09g52780D protein. (474 aa)
	BnaAnng18930D	BnaAnng18930D protein. (521 aa)
	BnaCnng40350D	BnaCnng40350D protein. (688 aa)
	BnaAnng20310D	BnaAnng20310D protein. (196 aa)
	BnaA03g57210D	BnaA03g57210D protein. (485 aa)
	BnaCnng40370D	BnaCnng40370D protein. (103 aa)
	BnaA02g35820D	BnaA02g35820D protein. (892 aa)
	BnaAnng21570D	BnaAnng21570D protein. (180 aa)
	BnaCnng51790D	BnaCnng51790D protein. (89 aa)
	BnaAnng23730D	BnaAnng23730D protein. (251 aa)
	BnaCnng65100D	BnaCnng65100D protein. (664 aa)
	BnaA09g53020D	BnaA09g53020D protein. (298 aa)
	BnaAnng36350D	BnaAnng36350D protein. (536 aa)
	BnaCnng64810D	BnaCnng64810D protein. (661 aa)
	BnaA10g30170D	BnaA10g30170D protein. (374 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g18480D	BnaA01g31610D	A0A078G917	A0A078HX76	BnaA01g18480D protein.	BnaA01g31610D protein.	0.994
BnaA01g18480D	BnaA01g32880D	A0A078G917	A0A078HAI1	BnaA01g18480D protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.973
BnaA01g18480D	BnaA02g10840D	A0A078G917	A0A078GPE0	BnaA01g18480D protein.	BnaA02g10840D protein.	0.971
BnaA01g18480D	BnaA02g29790D	A0A078G917	A0A078I5H1	BnaA01g18480D protein.	BnaA02g29790D protein.	0.970
BnaA01g18480D	BnaA02g35820D	A0A078G917	A0A078JH67	BnaA01g18480D protein.	BnaA02g35820D protein.	0.994
BnaA01g18480D	BnaA02g36530D	A0A078G917	A0A078J0U8	BnaA01g18480D protein.	BnaA02g36530D protein.	0.984
BnaA01g18480D	BnaA03g47570D	A0A078G917	A0A078IJL7	BnaA01g18480D protein.	BnaA03g47570D protein.	0.971
BnaA01g18480D	BnaA03g49270D	A0A078G917	A0A078GWJ4	BnaA01g18480D protein.	BnaA03g49270D protein.	0.666
BnaA01g18480D	BnaA03g51220D	A0A078G917	A0A078FKA9	BnaA01g18480D protein.	BnaA03g51220D protein.	0.925
BnaA01g18480D	BnaA03g57210D	A0A078G917	A0A078JCJ3	BnaA01g18480D protein.	BnaA03g57210D protein.	0.981
BnaA01g18480D	BnaA04g25270D	A0A078G917	A0A078GY38	BnaA01g18480D protein.	BnaA04g25270D protein.	0.967
BnaA01g18480D	BnaA04g25290D	A0A078G917	A0A078H0S9	BnaA01g18480D protein.	BnaA04g25290D protein.	0.932
BnaA01g18480D	BnaA04g25300D	A0A078G917	A0A078GZ61	BnaA01g18480D protein.	BnaA04g25300D protein.	0.932
BnaA01g18480D	BnaA04g25310D	A0A078G917	A0A078GV72	BnaA01g18480D protein.	BnaA04g25310D protein.	0.932
BnaA01g18480D	BnaA04g27370D	A0A078G917	A0A078J1H7	BnaA01g18480D protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.979
BnaA01g18480D	BnaA05g09270D	A0A078G917	A0A078FWE2	BnaA01g18480D protein.	BnaA05g09270D protein.	0.890
BnaA01g18480D	BnaA05g19390D	A0A078G917	A0A078GFU7	BnaA01g18480D protein.	BnaA05g19390D protein.	0.992
BnaA01g18480D	BnaA05g26350D	A0A078G917	A0A078F5S8	BnaA01g18480D protein.	BnaA05g26350D protein.	0.970
BnaA01g18480D	BnaA05g27100D	A0A078G917	A0A078F5Z4	BnaA01g18480D protein.	BnaA05g27100D protein.	0.976
BnaA01g18480D	BnaA05g28310D	A0A078G917	A0A078F2A6	BnaA01g18480D protein.	BnaA05g28310D protein.	0.994