19 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaCnng73110D	BnaCnng73110D protein. (73 aa)
	BnaC03g12700D	BnaC03g12700D protein. (381 aa)
	BnaA05g27340D	7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (149 aa)
	BnaA05g27330D	7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (150 aa)
	BnaC03g27330D	BnaC03g27330D protein. (304 aa)
	BnaA05g30330D	BnaA05g30330D protein. (451 aa)
	BnaC05g44740D	BnaC05g44740D protein. (117 aa)
	BnaC05g44750D	BnaC05g44750D protein. (453 aa)
	BnaA04g16750D	BnaA04g16750D protein. (899 aa)
	BnaA06g36040D	BnaA06g36040D protein. (527 aa)
	BnaA01g32400D	BnaA01g32400D protein. (447 aa)
	BnaA01g06970D	BnaA01g06970D protein. (547 aa)
	BnaA03g52900D	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. (497 aa)
	BnaAnng09490D	7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (153 aa)
	BnaA07g14330D	BnaA07g14330D protein. (906 aa)
	BnaA02g30310D	BnaA02g30310D protein. (438 aa)
	BnaCnng46040D	BnaCnng46040D protein. (939 aa)
	BnaCnng71860D	BnaCnng71860D protein. (147 aa)
	BnaA09g43860D	BnaA09g43860D protein. (126 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g06970D	BnaA01g32400D	A0A078I0D7	A0A078HBS9	BnaA01g06970D protein.	BnaA01g32400D protein.	0.986
BnaA01g06970D	BnaA02g30310D	A0A078I0D7	A0A078IMA2	BnaA01g06970D protein.	BnaA02g30310D protein.	0.986
BnaA01g06970D	BnaA03g52900D	A0A078I0D7	A0A078I5G1	BnaA01g06970D protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.719
BnaA01g06970D	BnaA04g16750D	A0A078I0D7	A0A078H2U3	BnaA01g06970D protein.	BnaA04g16750D protein.	0.835
BnaA01g06970D	BnaA05g27330D	A0A078I0D7	A0A078F5V2	BnaA01g06970D protein.	7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.	0.999
BnaA01g06970D	BnaA05g27340D	A0A078I0D7	A0A078F9P1	BnaA01g06970D protein.	7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.	0.999
BnaA01g06970D	BnaA05g30330D	A0A078I0D7	A0A078GH72	BnaA01g06970D protein.	BnaA05g30330D protein.	0.986
BnaA01g06970D	BnaA06g36040D	A0A078I0D7	A0A078H7J7	BnaA01g06970D protein.	BnaA06g36040D protein.	0.900
BnaA01g06970D	BnaA07g14330D	A0A078I0D7	A0A078IFC7	BnaA01g06970D protein.	BnaA07g14330D protein.	0.835
BnaA01g06970D	BnaA09g43860D	A0A078I0D7	A0A078FLT7	BnaA01g06970D protein.	BnaA09g43860D protein.	0.900
BnaA01g06970D	BnaAnng09490D	A0A078I0D7	A0A078ICS6	BnaA01g06970D protein.	7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.	0.999
BnaA01g06970D	BnaC03g12700D	A0A078I0D7	A0A078FFV0	BnaA01g06970D protein.	BnaC03g12700D protein.	0.820
BnaA01g06970D	BnaC03g27330D	A0A078I0D7	A0A078G7S1	BnaA01g06970D protein.	BnaC03g27330D protein.	0.719
BnaA01g06970D	BnaC05g44740D	A0A078I0D7	A0A078GSG1	BnaA01g06970D protein.	BnaC05g44740D protein.	0.986
BnaA01g06970D	BnaC05g44750D	A0A078I0D7	A0A078GTW6	BnaA01g06970D protein.	BnaC05g44750D protein.	0.986
BnaA01g06970D	BnaCnng46040D	A0A078I0D7	A0A078JHP7	BnaA01g06970D protein.	BnaCnng46040D protein.	0.835
BnaA01g06970D	BnaCnng71860D	A0A078I0D7	A0A078JXP5	BnaA01g06970D protein.	BnaCnng71860D protein.	0.835
BnaA01g06970D	BnaCnng73110D	A0A078I0D7	A0A078K116	BnaA01g06970D protein.	BnaCnng73110D protein.	0.835
BnaA01g32400D	BnaA01g06970D	A0A078HBS9	A0A078I0D7	BnaA01g32400D protein.	BnaA01g06970D protein.	0.986
BnaA01g32400D	BnaA03g52900D	A0A078HBS9	A0A078I5G1	BnaA01g32400D protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.585