STRINGSTRING
BnaCnng71810D BnaCnng71810D BnaA07g25530D BnaA07g25530D BnaA05g17410D BnaA05g17410D BnaA05g17400D BnaA05g17400D BnaA05g17430D BnaA05g17430D BnaC04g12040D BnaC04g12040D BnaC04g12030D BnaC04g12030D BnaC09g40620D BnaC09g40620D BnaA06g34530D BnaA06g34530D BnaA06g35110D BnaA06g35110D BnaC02g40020D BnaC02g40020D BnaA06g19240D BnaA06g19240D BnaC02g33700D BnaC02g33700D BnaA06g10460D BnaA06g10460D BnaC05g30410D BnaC05g30410D BnaA01g24820D BnaA01g24820D BnaC06g27330D BnaC06g27330D BnaA02g27130D BnaA02g27130D BnaCnng24660D BnaCnng24660D BnaC07g48770D BnaC07g48770D BnaCnng33690D BnaCnng33690D BnaAnng27540D BnaAnng27540D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaCnng71810DBnaCnng71810D protein. (104 aa)
BnaA07g25530DGlutamate decarboxylase; Belongs to the group II decarboxylase family. (494 aa)
BnaA05g17410DBnaA05g17410D protein. (236 aa)
BnaA05g17400DBnaA05g17400D protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (472 aa)
BnaA05g17430DGamma-aminobutyric acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)
BnaC04g12040DBnaC04g12040D protein. (121 aa)
BnaC04g12030DBnaC04g12030D protein. (346 aa)
BnaC09g40620DGlutamate decarboxylase; Belongs to the group II decarboxylase family. (492 aa)
BnaA06g34530DBnaA06g34530D protein. (678 aa)
BnaA06g35110DBnaA06g35110D protein. (517 aa)
BnaC02g40020DBnaC02g40020D protein. (324 aa)
BnaA06g19240DGlutamate decarboxylase; Belongs to the group II decarboxylase family. (392 aa)
BnaC02g33700DBnaC02g33700D protein. (544 aa)
BnaA06g10460DBnaA06g10460D protein. (152 aa)
BnaC05g30410DGamma-aminobutyric acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)
BnaA01g24820DGamma-aminobutyric acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (506 aa)
BnaC06g27330DGlutamate decarboxylase; Belongs to the group II decarboxylase family. (494 aa)
BnaA02g27130DBnaA02g27130D protein. (544 aa)
BnaCnng24660DBnaCnng24660D protein. (177 aa)
BnaC07g48770DBnaC07g48770D protein. (517 aa)
BnaCnng33690DBnaCnng33690D protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (498 aa)
BnaAnng27540DGlutamate decarboxylase; Belongs to the group II decarboxylase family. (405 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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