22 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaUnng04940D	BnaUnng04940D protein; Belongs to the complex I LYR family. (104 aa)
	BnaA01g30740D	BnaA01g30740D protein. (86 aa)
	BnaCnng22940D	BnaCnng22940D protein. (133 aa)
	BnaA05g26780D	BnaA05g26780D protein. (142 aa)
	BnaA09g40160D	BnaA09g40160D protein; Belongs to the complex I LYR family. (104 aa)
	BnaA03g01640D	BnaA03g01640D protein; Belongs to the complex I LYR family. (87 aa)
	BnaC03g65880D	BnaC03g65880D protein; Belongs to the complex I LYR family. (117 aa)
	BnaC07g31090D	BnaC07g31090D protein; Belongs to the complex I LYR family. (87 aa)
	BnaA01g27230D	BnaA01g27230D protein; Belongs to the complex I LYR family. (91 aa)
	BnaC01g34700D	BnaC01g34700D protein; Belongs to the complex I LYR family. (91 aa)
	BnaC05g40800D	BnaC05g40800D protein. (142 aa)
	BnaAnng06870D	BnaAnng06870D protein; Belongs to the complex I LYR family. (87 aa)
	BnaA08g06980D	BnaA08g06980D protein; Belongs to the complex I LYR family. (103 aa)
	BnaA02g29940D	BnaA02g29940D protein; Belongs to the complex I LYR family. (100 aa)
	BnaA03g53000D	BnaA03g53000D protein; Belongs to the complex I LYR family. (117 aa)
	BnaA05g20560D	BnaA05g20560D protein. (744 aa)
	BnaC02g42120D	BnaC02g42120D protein; Belongs to the complex I LYR family. (87 aa)
	BnaC02g43160D	BnaC02g43160D protein; Belongs to the complex I LYR family. (87 aa)
	BnaA01g26100D	BnaA01g26100D protein; Belongs to the complex I LYR family. (81 aa)
	BnaCnng41200D	BnaCnng41200D protein. (139 aa)
	BnaC05g49750D	BnaC05g49750D protein; Belongs to the complex I LYR family. (161 aa)
	BnaAnng21360D	BnaAnng21360D protein; Belongs to the complex I LYR family. (119 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g30740D	BnaA03g53000D	A0A078IHV1	A0A078I5H2	BnaA01g30740D protein.	BnaA03g53000D protein; Belongs to the complex I LYR family.	0.998
BnaA01g30740D	BnaA05g26780D	A0A078IHV1	A0A078F5R0	BnaA01g30740D protein.	BnaA05g26780D protein.	0.540
BnaA01g30740D	BnaC03g65880D	A0A078IHV1	A0A078FSH3	BnaA01g30740D protein.	BnaC03g65880D protein; Belongs to the complex I LYR family.	0.998
BnaA01g30740D	BnaC05g40800D	A0A078IHV1	A0A078HXS2	BnaA01g30740D protein.	BnaC05g40800D protein.	0.540
BnaA01g30740D	BnaCnng22940D	A0A078IHV1	A0A078EMU2	BnaA01g30740D protein.	BnaCnng22940D protein.	0.540
BnaA03g01640D	BnaA09g40160D	A0A078FGX3	A0A078FAN7	BnaA03g01640D protein; Belongs to the complex I LYR family.	BnaA09g40160D protein; Belongs to the complex I LYR family.	0.465
BnaA03g53000D	BnaA01g30740D	A0A078I5H2	A0A078IHV1	BnaA03g53000D protein; Belongs to the complex I LYR family.	BnaA01g30740D protein.	0.998
BnaA03g53000D	BnaA05g26780D	A0A078I5H2	A0A078F5R0	BnaA03g53000D protein; Belongs to the complex I LYR family.	BnaA05g26780D protein.	0.998
BnaA03g53000D	BnaC03g65880D	A0A078I5H2	A0A078FSH3	BnaA03g53000D protein; Belongs to the complex I LYR family.	BnaC03g65880D protein; Belongs to the complex I LYR family.	0.900
BnaA03g53000D	BnaC05g40800D	A0A078I5H2	A0A078HXS2	BnaA03g53000D protein; Belongs to the complex I LYR family.	BnaC05g40800D protein.	0.998
BnaA03g53000D	BnaCnng22940D	A0A078I5H2	A0A078EMU2	BnaA03g53000D protein; Belongs to the complex I LYR family.	BnaCnng22940D protein.	0.998
BnaA05g26780D	BnaA01g30740D	A0A078F5R0	A0A078IHV1	BnaA05g26780D protein.	BnaA01g30740D protein.	0.540
BnaA05g26780D	BnaA03g53000D	A0A078F5R0	A0A078I5H2	BnaA05g26780D protein.	BnaA03g53000D protein; Belongs to the complex I LYR family.	0.998
BnaA05g26780D	BnaC03g65880D	A0A078F5R0	A0A078FSH3	BnaA05g26780D protein.	BnaC03g65880D protein; Belongs to the complex I LYR family.	0.998
BnaA05g26780D	BnaC05g40800D	A0A078F5R0	A0A078HXS2	BnaA05g26780D protein.	BnaC05g40800D protein.	0.543
BnaA05g26780D	BnaCnng22940D	A0A078F5R0	A0A078EMU2	BnaA05g26780D protein.	BnaCnng22940D protein.	0.542
BnaA09g40160D	BnaA03g01640D	A0A078FAN7	A0A078FGX3	BnaA09g40160D protein; Belongs to the complex I LYR family.	BnaA03g01640D protein; Belongs to the complex I LYR family.	0.465
BnaA09g40160D	BnaAnng06870D	A0A078FAN7	A0A078HYA2	BnaA09g40160D protein; Belongs to the complex I LYR family.	BnaAnng06870D protein; Belongs to the complex I LYR family.	0.465
BnaA09g40160D	BnaC02g42120D	A0A078FAN7	A0A078IA83	BnaA09g40160D protein; Belongs to the complex I LYR family.	BnaC02g42120D protein; Belongs to the complex I LYR family.	0.465
BnaA09g40160D	BnaC02g43160D	A0A078FAN7	A0A078IC38	BnaA09g40160D protein; Belongs to the complex I LYR family.	BnaC02g43160D protein; Belongs to the complex I LYR family.	0.465