STRINGSTRING
BnaA03g18490D BnaA03g18490D BnaC06g15520D BnaC06g15520D BnaC04g06290D BnaC04g06290D BnaA08g06610D BnaA08g06610D BnaA01g07180D BnaA01g07180D BnaA03g53720D BnaA03g53720D BnaA03g53730D BnaA03g53730D BnaA09g55720D BnaA09g55720D BnaCnng10420D BnaCnng10420D BnaCnng30060D BnaCnng30060D BnaA09g55020D BnaA09g55020D BnaCnng07580D BnaCnng07580D BnaA04g17370D BnaA04g17370D BnaC03g21980D BnaC03g21980D BnaC03g16690D BnaC03g16690D BnaC07g30920D BnaC07g30920D BnaC03g27280D BnaC03g27280D BnaC09g13970D BnaC09g13970D BnaC02g02780D BnaC02g02780D BnaA05g12180D BnaA05g12180D BnaA09g13590D BnaA09g13590D BnaA03g01150D BnaA03g01150D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA03g18490DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (476 aa)
BnaC06g15520DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (475 aa)
BnaC04g06290DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (486 aa)
BnaA08g06610DBnaA08g06610D protein. (440 aa)
BnaA01g07180DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (488 aa)
BnaA03g53720DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (712 aa)
BnaA03g53730DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (413 aa)
BnaA09g55720DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (366 aa)
BnaCnng10420DBnaCnng10420D protein. (809 aa)
BnaCnng30060DBnaCnng30060D protein. (366 aa)
BnaA09g55020DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (486 aa)
BnaCnng07580DBnaCnng07580D protein. (785 aa)
BnaA04g17370DBnaA04g17370D protein. (367 aa)
BnaC03g21980DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (476 aa)
BnaC03g16690DBnaC03g16690D protein. (367 aa)
BnaC07g30920DBnaC07g30920D protein. (290 aa)
BnaC03g27280DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (407 aa)
BnaC09g13970DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (1344 aa)
BnaC02g02780DBnaC02g02780D protein. (806 aa)
BnaA05g12180DBnaA05g12180D protein. (388 aa)
BnaA09g13590DPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (1344 aa)
BnaA03g01150DBnaA03g01150D protein. (759 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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