STRINGSTRING
BnaC03g72450D BnaC03g72450D BnaA09g39760D BnaA09g39760D BnaC09g00320D BnaC09g00320D BnaA06g02150D BnaA06g02150D BnaA04g05330D BnaA04g05330D BnaA08g07930D BnaA08g07930D BnaA07g09990D BnaA07g09990D BnaA06g25140D BnaA06g25140D BnaC05g09760D BnaC05g09760D BnaA05g08370D BnaA05g08370D BnaC06g04770D BnaC06g04770D BnaC09g21810D BnaC09g21810D BnaA09g15900D BnaA09g15900D BnaA09g19810D BnaA09g19810D BnaA08g01820D BnaA08g01820D BnaCnng19460D BnaCnng19460D BnaC03g77920D BnaC03g77920D BnaA08g30590D BnaA08g30590D BnaAnng33460D BnaAnng33460D BnaUnng04590D BnaUnng04590D BnaCnng72870D BnaCnng72870D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC03g72450DBnaC03g72450D protein. (157 aa)
BnaA09g39760DBnaA04g27270D protein. (157 aa)
BnaC09g00320DBnaC09g00320D protein. (201 aa)
BnaA06g02150DUbiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (481 aa)
BnaA04g05330DBnaA04g05330D protein. (71 aa)
BnaA08g07930DBnaA08g07930D protein. (154 aa)
BnaA07g09990DBnaA07g09990D protein. (156 aa)
BnaA06g25140DBnaA06g25140D protein. (247 aa)
BnaC05g09760DBnaC05g09760D protein. (78 aa)
BnaA05g08370DBnaA05g08370D protein. (158 aa)
BnaC06g04770DUbiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (481 aa)
BnaC09g21810DBnaC09g21810D protein. (101 aa)
BnaA09g15900DBnaA09g15900D protein. (818 aa)
BnaA09g19810DBnaA09g19810D protein. (153 aa)
BnaA08g01820DUbiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (483 aa)
BnaCnng19460DBnaCnng19460D protein. (156 aa)
BnaC03g77920DUbiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (566 aa)
BnaA08g30590DBnaA08g30590D protein. (82 aa)
BnaAnng33460DBnaAnng33460D protein. (105 aa)
BnaUnng04590DBnaUnng04590D protein. (83 aa)
BnaCnng72870DBnaCnng72870D protein. (75 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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