STRINGSTRING
BnaA01g32590D BnaA01g32590D BnaA05g30630D BnaA05g30630D BnaA04g05950D BnaA04g05950D BnaA09g07080D BnaA09g07080D BnaC05g04370D BnaC05g04370D BnaC03g49190D BnaC03g49190D BnaC05g04350D BnaC05g04350D BnaCnng35000D BnaCnng35000D BnaA10g28070D BnaA10g28070D BnaA10g28090D BnaA10g28090D BnaA06g24040D BnaA06g24040D BnaA10g28060D BnaA10g28060D BnaA06g38800D BnaA06g38800D BnaA01g18160D BnaA01g18160D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA01g32590DBnaA01g32590D protein. (128 aa)
BnaA05g30630DBnaA05g30630D protein. (820 aa)
BnaA04g05950DBnaA04g05950D protein. (439 aa)
BnaA09g07080DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (680 aa)
BnaC05g04370DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (674 aa)
BnaC03g49190DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (689 aa)
BnaC05g04350DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (677 aa)
BnaCnng35000DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (664 aa)
BnaA10g28070DBnaA10g28070D protein. (253 aa)
BnaA10g28090DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (675 aa)
BnaA06g24040DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (690 aa)
BnaA10g28060DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (675 aa)
BnaA06g38800DBnaA06g38800D protein. (409 aa)
BnaA01g18160DAcyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (664 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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