STRINGSTRING
BnaC01g24100D BnaC01g24100D BnaA04g27280D BnaA04g27280D BnaAnng11410D BnaAnng11410D BnaC02g39570D BnaC02g39570D BnaC04g23980D BnaC04g23980D BnaAnng34240D BnaAnng34240D BnaA09g03590D BnaA09g03590D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC01g24100DBnaA01g13200D protein. (69 aa)
BnaA04g27280DBnaA04g27280D protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
BnaAnng11410DBnaAnng11410D protein. (531 aa)
BnaC02g39570DBnaC02g39570D protein. (525 aa)
BnaC04g23980DBnaC04g23980D protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
BnaAnng34240DBnaAnng34240D protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
BnaA09g03590DBnaA09g03590D protein. (535 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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