STRINGSTRING
BnaC05g05090D BnaC05g05090D BnaC03g72450D BnaC03g72450D BnaC08g45260D BnaC08g45260D BnaA09g39760D BnaA09g39760D BnaC04g26510D BnaC04g26510D BnaA07g09990D BnaA07g09990D BnaA08g20480D BnaA08g20480D BnaA05g12400D BnaA05g12400D BnaA04g28500D BnaA04g28500D BnaA04g28510D BnaA04g28510D BnaCnng30170D BnaCnng30170D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC05g05090DBnaC05g05090D protein. (131 aa)
BnaC03g72450DBnaC03g72450D protein. (157 aa)
BnaC08g45260DBnaC08g45260D protein. (130 aa)
BnaA09g39760DBnaA04g27270D protein. (157 aa)
BnaC04g26510DReticulon-like protein. (445 aa)
BnaA07g09990DBnaA07g09990D protein. (156 aa)
BnaA08g20480DBnaA08g20480D protein. (87 aa)
BnaA05g12400DBnaA05g12400D protein. (342 aa)
BnaA04g28500DBnaA04g28500D protein. (180 aa)
BnaA04g28510DBnaA04g28510D protein. (178 aa)
BnaCnng30170DBnaCnng30170D protein. (304 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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