STRINGSTRING
BnaC03g72450D BnaC03g72450D BnaC03g35820D BnaC03g35820D BnaC05g23240D BnaC05g23240D BnaC09g43450D BnaC09g43450D BnaA09g39760D BnaA09g39760D BnaA05g17330D BnaA05g17330D BnaA03g00850D BnaA03g00850D BnaC03g58290D BnaC03g58290D BnaA09g17210D BnaA09g17210D BnaC06g14490D BnaC06g14490D BnaA07g08640D BnaA07g08640D BnaA09g20570D BnaA09g20570D BnaA09g20560D BnaA09g20560D BnaA04g18010D BnaA04g18010D BnaA04g21190D BnaA04g21190D BnaA09g04990D BnaA09g04990D BnaA09g30460D BnaA09g30460D BnaC01g38940D BnaC01g38940D BnaA06g02640D BnaA06g02640D BnaC03g17240D BnaC03g17240D BnaA07g09990D BnaA07g09990D BnaC07g16840D BnaC07g16840D BnaA08g26880D BnaA08g26880D BnaC09g22070D BnaC09g22070D BnaC06g03890D BnaC06g03890D BnaA01g24770D BnaA01g24770D BnaC07g07120D BnaC07g07120D BnaAnng06020D BnaAnng06020D BnaA01g32030D BnaA01g32030D BnaA08g20480D BnaA08g20480D BnaC05g43180D BnaC05g43180D BnaA07g12800D BnaA07g12800D BnaC02g01060D BnaC02g01060D BnaC01g31670D BnaC01g31670D BnaC01g31420D BnaC01g31420D BnaCnng27050D BnaCnng27050D BnaA05g28710D BnaA05g28710D BnaCnng30170D BnaCnng30170D BnaC06g42230D BnaC06g42230D BnaA10g29870D BnaA10g29870D BnaAnng21640D BnaAnng21640D BnaCnng51760D BnaCnng51760D BnaA03g57130D BnaA03g57130D BnaAnng37770D BnaAnng37770D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC03g72450DBnaC03g72450D protein. (157 aa)
BnaC03g35820DBnaC03g35820D protein. (809 aa)
BnaC05g23240DBnaC05g23240D protein; Belongs to the AAA ATPase family. (207 aa)
BnaC09g43450DBnaC09g43450D protein. (675 aa)
BnaA09g39760DBnaA04g27270D protein. (157 aa)
BnaA05g17330DBnaA05g17330D protein. (238 aa)
BnaA03g00850DBnaA03g00850D protein. (798 aa)
BnaC03g58290DUbiquitin thioesterase. (300 aa)
BnaA09g17210DBnaA09g17200D protein. (188 aa)
BnaC06g14490DBnaC06g14490D protein. (810 aa)
BnaA07g08640DBnaA07g08640D protein. (200 aa)
BnaA09g20570DBnaA09g20570D protein. (195 aa)
BnaA09g20560DBnaA09g20560D protein. (114 aa)
BnaA04g18010DBnaA04g18010D protein. (669 aa)
BnaA04g21190DRNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (544 aa)
BnaA09g04990DBnaA09g04990D protein. (488 aa)
BnaA09g30460DBnaA09g30460D protein. (425 aa)
BnaC01g38940DBnaC01g38940D protein. (810 aa)
BnaA06g02640DBnaA06g02640D protein. (208 aa)
BnaC03g17240DBnaC03g17240D protein. (116 aa)
BnaA07g09990DBnaA07g09990D protein. (156 aa)
BnaC07g16840DBnaC07g16840D protein. (357 aa)
BnaA08g26880DRNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (573 aa)
BnaC09g22070DBnaC09g22070D protein. (716 aa)
BnaC06g03890DBnaC06g03890D protein. (208 aa)
BnaA01g24770DBnaA01g24770D protein. (237 aa)
BnaC07g07120DBnaC07g07120D protein. (483 aa)
BnaAnng06020DTranslation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (684 aa)
BnaA01g32030DBnaA01g32030D protein. (810 aa)
BnaA08g20480DBnaA08g20480D protein. (87 aa)
BnaC05g43180DBnaC05g43180D protein. (808 aa)
BnaA07g12800DBnaA07g12800D protein. (283 aa)
BnaC02g01060DTranslation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (675 aa)
BnaC01g31670DBnaC01g31670D protein. (243 aa)
BnaC01g31420DBnaC01g31420D protein. (242 aa)
BnaCnng27050DBnaCnng27050D protein. (669 aa)
BnaA05g28710DBnaA05g28710D protein. (808 aa)
BnaCnng30170DBnaCnng30170D protein. (304 aa)
BnaC06g42230DTranslation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (688 aa)
BnaA10g29870DBnaA10g29870D protein. (674 aa)
BnaAnng21640DBnaAnng21640D protein. (338 aa)
BnaCnng51760DUbiquitin thioesterase. (281 aa)
BnaA03g57130DBnaA03g57130D protein. (432 aa)
BnaAnng37770DBnaAnng37770D protein. (263 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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