STRINGSTRING
BnaC02g44700D BnaC02g44700D BnaAnng27490D BnaAnng27490D BnaCnng77830D BnaCnng77830D BnaA07g37520D BnaA07g37520D BnaC03g72450D BnaC03g72450D BnaC06g14890D BnaC06g14890D BnaA02g06670D BnaA02g06670D BnaA09g39760D BnaA09g39760D BnaA03g52280D BnaA03g52280D BnaA10g07350D BnaA10g07350D BnaA10g07340D BnaA10g07340D BnaC04g15480D BnaC04g15480D BnaC09g30700D BnaC09g30700D BnaC09g30690D BnaC09g30690D BnaA06g20800D BnaA06g20800D BnaA07g09990D BnaA07g09990D BnaC09g36190D BnaC09g36190D BnaCnng05860D BnaCnng05860D BnaA02g09700D BnaA02g09700D BnaC04g27070D BnaC04g27070D BnaA10g12870D BnaA10g12870D BnaC08g02310D BnaC08g02310D BnaA08g20480D BnaA08g20480D BnaA05g33420D BnaA05g33420D BnaA07g37600D BnaA07g37600D BnaC02g44590D BnaC02g44590D BnaCnng30170D BnaCnng30170D BnaA03g56440D BnaA03g56440D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaC02g44700DChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (143 aa)
BnaAnng27490DBnaAnng27490D protein. (516 aa)
BnaCnng77830DHistone H2B; Belongs to the histone H2B family. (153 aa)
BnaA07g37520DHistone H2B; Belongs to the histone H2B family. (149 aa)
BnaC03g72450DBnaC03g72450D protein. (157 aa)
BnaC06g14890DHistone H2B; Belongs to the histone H2B family. (100 aa)
BnaA02g06670DHistone H2B; Belongs to the histone H2B family. (142 aa)
BnaA09g39760DBnaA04g27270D protein. (157 aa)
BnaA03g52280DBnaA03g52280D protein. (262 aa)
BnaA10g07350DChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (234 aa)
BnaA10g07340DBnaA10g07340D protein. (403 aa)
BnaC04g15480DHistone H2B; Belongs to the histone H2B family. (148 aa)
BnaC09g30700DChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (234 aa)
BnaC09g30690DDouble-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (687 aa)
BnaA06g20800DBnaA06g20800D protein; Belongs to the PI3/PI4-kinase family. (3116 aa)
BnaA07g09990DBnaA07g09990D protein. (156 aa)
BnaC09g36190DHistone H2B; Belongs to the histone H2B family. (141 aa)
BnaCnng05860DBnaCnng05860D protein. (535 aa)
BnaA02g09700DChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (256 aa)
BnaC04g27070DHistone H2B; Belongs to the histone H2B family. (138 aa)
BnaA10g12870DHistone H2B; Belongs to the histone H2B family. (150 aa)
BnaC08g02310DHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
BnaA08g20480DBnaA08g20480D protein. (87 aa)
BnaA05g33420DBnaA05g33420D protein. (534 aa)
BnaA07g37600DHistone H2B; Belongs to the histone H2B family. (137 aa)
BnaC02g44590DChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (234 aa)
BnaCnng30170DBnaCnng30170D protein. (304 aa)
BnaA03g56440DBnaA03g56440D protein. (305 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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