STRINGSTRING
BnaA09g39160D BnaA09g39160D BnaC09g21280D BnaC09g21280D BnaCnng66660D BnaCnng66660D BnaCnng65860D BnaCnng65860D BnaCnng69690D BnaCnng69690D BnaCnng61970D BnaCnng61970D BnaAnng28990D BnaAnng28990D BnaAnng29500D BnaAnng29500D BnaAnng29490D BnaAnng29490D BnaAnng27830D BnaAnng27830D BnaCnng55410D BnaCnng55410D BnaCnng41550D BnaCnng41550D BnaAnng17060D BnaAnng17060D BnaA07g38100D BnaA07g38100D BnaCnng30170D BnaCnng30170D BnaA09g54950D BnaA09g54950D BnaA09g15700D BnaA09g15700D BnaCnng20980D BnaCnng20980D BnaC03g72450D BnaC03g72450D BnaC09g12610D BnaC09g12610D BnaC06g14970D BnaC06g14970D BnaC09g12620D BnaC09g12620D BnaC03g48190D BnaC03g48190D BnaA09g39760D BnaA09g39760D BnaC04g26740D BnaC04g26740D BnaC04g12080D BnaC04g12080D BnaA03g51390D BnaA03g51390D BnaC02g23320D BnaC02g23320D BnaA06g32120D BnaA06g32120D BnaA08g02970D BnaA08g02970D BnaA02g22640D BnaA02g22640D BnaA08g03990D BnaA08g03990D BnaC08g40690D BnaC08g40690D BnaC06g00220D BnaC06g00220D BnaC06g00200D BnaC06g00200D BnaC04g04630D BnaC04g04630D BnaA04g19020D BnaA04g19020D BnaC05g09110D BnaC05g09110D BnaA08g24450D BnaA08g24450D BnaC05g09120D BnaC05g09120D BnaA08g24440D BnaA08g24440D BnaC02g28740D BnaC02g28740D BnaA09g44670D BnaA09g44670D BnaC02g28750D BnaC02g28750D BnaC04g43310D BnaC04g43310D BnaA09g46670D BnaA09g46670D BnaC03g69880D BnaC03g69880D BnaA07g09990D BnaA07g09990D BnaA06g14260D BnaA06g14260D BnaA01g05950D BnaA01g05950D BnaC07g32150D BnaC07g32150D BnaC01g36890D BnaC01g36890D BnaA02g28940D BnaA02g28940D BnaC03g56940D BnaC03g56940D BnaC03g67700D BnaC03g67700D BnaC06g02260D BnaC06g02260D BnaA02g17620D BnaA02g17620D BnaA09g38250D BnaA09g38250D BnaC06g02270D BnaC06g02270D BnaA08g20480D BnaA08g20480D BnaC07g14750D BnaC07g14750D BnaC05g15660D BnaC05g15660D BnaC04g22530D BnaC04g22530D BnaA08g20130D BnaA08g20130D BnaC08g04630D BnaC08g04630D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA09g39160DBnaA09g39160D protein; Belongs to the SKP1 family. (344 aa)
BnaC09g21280DBnaC09g21280D protein; Belongs to the SKP1 family. (159 aa)
BnaCnng66660DBnaCnng66660D protein. (83 aa)
BnaCnng65860DBnaCnng65860D protein. (77 aa)
BnaCnng69690DBnaCnng69690D protein. (352 aa)
BnaCnng61970DBnaCnng61970D protein; Belongs to the SKP1 family. (131 aa)
BnaAnng28990DBnaAnng28990D protein; Belongs to the SKP1 family. (152 aa)
BnaAnng29500DBnaAnng29500D protein; Belongs to the SKP1 family. (155 aa)
BnaAnng29490DBnaAnng29490D protein. (69 aa)
BnaAnng27830DBnaAnng27830D protein; Belongs to the SKP1 family. (156 aa)
BnaCnng55410DBnaCnng55410D protein; Belongs to the SKP1 family. (161 aa)
BnaCnng41550DBnaCnng41550D protein; Belongs to the SKP1 family. (161 aa)
BnaAnng17060D26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (969 aa)
BnaA07g38100DBnaA07g38100D protein; Belongs to the SKP1 family. (422 aa)
BnaCnng30170DBnaCnng30170D protein. (304 aa)
BnaA09g54950DBnaA09g54950D protein. (242 aa)
BnaA09g15700DProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (275 aa)
BnaCnng20980DBnaCnng20980D protein; Belongs to the SKP1 family. (395 aa)
BnaC03g72450DBnaC03g72450D protein. (157 aa)
BnaC09g12610DBnaC09g12610D protein. (196 aa)
BnaC06g14970DBnaC06g14970D protein. (300 aa)
BnaC09g12620DBnaC09g12620D protein. (308 aa)
BnaC03g48190DBnaC03g48190D protein. (154 aa)
BnaA09g39760DBnaA04g27270D protein. (157 aa)
BnaC04g26740DBnaC04g26740D protein. (111 aa)
BnaC04g12080D26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (992 aa)
BnaA03g51390DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (233 aa)
BnaC02g23320DBnaC02g23320D protein; Belongs to the SKP1 family. (160 aa)
BnaA06g32120DBnaA06g32120D protein. (525 aa)
BnaA08g02970DBnaA08g02970D protein; Belongs to the SKP1 family. (159 aa)
BnaA02g22640DBnaA02g22640D protein; Belongs to the SKP1 family. (168 aa)
BnaA08g03990DProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (273 aa)
BnaC08g40690DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (274 aa)
BnaC06g00220DBnaC06g00220D protein. (55 aa)
BnaC06g00200DBnaC06g00200D protein. (98 aa)
BnaC04g04630DBnaC04g04630D protein; Belongs to the SKP1 family. (344 aa)
BnaA04g19020D26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1004 aa)
BnaC05g09110DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (274 aa)
BnaA08g24450DBnaA08g24450D protein. (320 aa)
BnaC05g09120DBnaC05g09120D protein. (315 aa)
BnaA08g24440DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (274 aa)
BnaC02g28740DBnaC02g28740D protein. (115 aa)
BnaA09g44670DBnaA09g44670D protein. (159 aa)
BnaC02g28750DProteasome endopeptidase complex; Belongs to the peptidase T1A family. (140 aa)
BnaC04g43310D26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1008 aa)
BnaA09g46670DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (274 aa)
BnaC03g69880DBnaC03g69880D protein. (523 aa)
BnaA07g09990DBnaA07g09990D protein. (156 aa)
BnaA06g14260DBnaA06g14260D protein; Belongs to the SKP1 family. (161 aa)
BnaA01g05950DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (233 aa)
BnaC07g32150DProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (250 aa)
BnaC01g36890DBnaC01g36890D protein. (553 aa)
BnaA02g28940DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (273 aa)
BnaC03g56940DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (274 aa)
BnaC03g67700DProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (233 aa)
BnaC06g02260DBnaC06g02260D protein; Belongs to the SKP1 family. (156 aa)
BnaA02g17620DBnaA02g17620D protein; Belongs to the SKP1 family. (160 aa)
BnaA09g38250DBnaA09g38250D protein; Belongs to the SKP1 family. (163 aa)
BnaC06g02270DBnaC06g02270D protein; Belongs to the SKP1 family. (150 aa)
BnaA08g20480DBnaA08g20480D protein. (87 aa)
BnaC07g14750DBnaC07g14750D protein; Belongs to the SKP1 family. (152 aa)
BnaC05g15660DBnaC05g15660D protein; Belongs to the SKP1 family. (161 aa)
BnaC04g22530DBnaC04g22530D protein; Belongs to the SKP1 family. (154 aa)
BnaA08g20130DBnaA08g20130D protein. (126 aa)
BnaC08g04630DProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (273 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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