15 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	BnaC07g03380D	BnaC07g03380D protein; Belongs to the small GTPase superfamily. Arf family. (245 aa)
	BnaA09g39760D	BnaA04g27270D protein. (157 aa)
	BnaC03g72450D	BnaC03g72450D protein. (157 aa)
	BnaA07g36220D	BnaA07g36220D protein. (81 aa)
	BnaC01g41870D	BnaC01g41870D protein. (325 aa)
	BnaA07g36210D	BnaA07g36210D protein. (82 aa)
	BnaCnng30170D	BnaCnng30170D protein. (304 aa)
	BnaA04g10140D	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (445 aa)
	BnaA08g20480D	BnaA08g20480D protein. (87 aa)
	BnaC04g32260D	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (444 aa)
	BnaC03g48380D	BnaC03g48380D protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	BnaA06g25260D	BnaA06g25260D protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	BnaA07g09990D	BnaA07g09990D protein. (156 aa)
	BnaA01g18430D	BnaA01g18430D protein. (325 aa)
	BnaA04g11810D	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (444 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g18430D	BnaA04g10140D	A0A078G901	A0A078I3Y8	BnaA01g18430D protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.999
BnaA01g18430D	BnaA04g11810D	A0A078G901	A0A078FNB0	BnaA01g18430D protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.990
BnaA01g18430D	BnaC01g41870D	A0A078G901	A0A078JHI6	BnaA01g18430D protein.	BnaC01g41870D protein.	0.900
BnaA01g18430D	BnaC04g32260D	A0A078G901	A0A078HJ12	BnaA01g18430D protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.997
BnaA04g10140D	BnaA01g18430D	A0A078I3Y8	A0A078G901	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	BnaA01g18430D protein.	0.999
BnaA04g10140D	BnaA04g11810D	A0A078I3Y8	A0A078FNB0	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.545
BnaA04g10140D	BnaC01g41870D	A0A078I3Y8	A0A078JHI6	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	BnaC01g41870D protein.	0.997
BnaA04g10140D	BnaC04g32260D	A0A078I3Y8	A0A078HJ12	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.900
BnaA04g11810D	BnaA01g18430D	A0A078FNB0	A0A078G901	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	BnaA01g18430D protein.	0.990
BnaA04g11810D	BnaA04g10140D	A0A078FNB0	A0A078I3Y8	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.545
BnaA04g11810D	BnaC01g41870D	A0A078FNB0	A0A078JHI6	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	BnaC01g41870D protein.	0.990
BnaA04g11810D	BnaC04g32260D	A0A078FNB0	A0A078HJ12	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.545
BnaA07g09990D	BnaA09g39760D	A0A078GMF0	A0A078FAH6	BnaA07g09990D protein.	BnaA04g27270D protein.	0.900
BnaA07g09990D	BnaC03g72450D	A0A078GMF0	A0A078D4W1	BnaA07g09990D protein.	BnaC03g72450D protein.	0.900
BnaA09g39760D	BnaA07g09990D	A0A078FAH6	A0A078GMF0	BnaA04g27270D protein.	BnaA07g09990D protein.	0.900
BnaA09g39760D	BnaC03g72450D	A0A078FAH6	A0A078D4W1	BnaA04g27270D protein.	BnaC03g72450D protein.	0.900
BnaC01g41870D	BnaA01g18430D	A0A078JHI6	A0A078G901	BnaC01g41870D protein.	BnaA01g18430D protein.	0.900
BnaC01g41870D	BnaA04g10140D	A0A078JHI6	A0A078I3Y8	BnaC01g41870D protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.997
BnaC01g41870D	BnaA04g11810D	A0A078JHI6	A0A078FNB0	BnaC01g41870D protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.990
BnaC01g41870D	BnaC04g32260D	A0A078JHI6	A0A078HJ12	BnaC01g41870D protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.997