15 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaA02g08760D	BnaA02g08760D protein. (64 aa)
	BnaA07g09990D	BnaA07g09990D protein. (156 aa)
	BnaA06g20800D	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family. (3116 aa)
	BnaC03g13670D	BnaC03g13670D protein. (730 aa)
	BnaA09g39760D	BnaA04g27270D protein. (157 aa)
	BnaC03g72450D	BnaC03g72450D protein. (157 aa)
	BnaC09g53570D	BnaC09g53570D protein. (697 aa)
	BnaCnng30170D	BnaCnng30170D protein. (304 aa)
	BnaC02g12350D	BnaC02g12350D protein. (283 aa)
	BnaC02g12360D	BnaC02g12360D protein. (116 aa)
	BnaAnng27490D	BnaAnng27490D protein. (516 aa)
	BnaA10g29080D	BnaA10g29080D protein. (434 aa)
	BnaCnng56710D	BnaCnng56710D protein. (221 aa)
	BnaA03g10970D	BnaA03g10970D protein. (755 aa)
	BnaA08g20480D	BnaA08g20480D protein. (87 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA02g08760D	BnaA06g20800D	A0A078G5K2	A0A078G8V4	BnaA02g08760D protein.	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	0.691
BnaA02g08760D	BnaA07g09990D	A0A078G5K2	A0A078GMF0	BnaA02g08760D protein.	BnaA07g09990D protein.	0.509
BnaA02g08760D	BnaA08g20480D	A0A078G5K2	A0A078HUN2	BnaA02g08760D protein.	BnaA08g20480D protein.	0.509
BnaA02g08760D	BnaA09g39760D	A0A078G5K2	A0A078FAH6	BnaA02g08760D protein.	BnaA04g27270D protein.	0.509
BnaA02g08760D	BnaAnng27490D	A0A078G5K2	A0A078JPY0	BnaA02g08760D protein.	BnaAnng27490D protein.	0.691
BnaA02g08760D	BnaC03g72450D	A0A078G5K2	A0A078D4W1	BnaA02g08760D protein.	BnaC03g72450D protein.	0.509
BnaA02g08760D	BnaCnng30170D	A0A078G5K2	A0A078J066	BnaA02g08760D protein.	BnaCnng30170D protein.	0.509
BnaA03g10970D	BnaA06g20800D	A0A078HHA4	A0A078G8V4	BnaA03g10970D protein.	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	0.691
BnaA03g10970D	BnaA07g09990D	A0A078HHA4	A0A078GMF0	BnaA03g10970D protein.	BnaA07g09990D protein.	0.509
BnaA03g10970D	BnaA08g20480D	A0A078HHA4	A0A078HUN2	BnaA03g10970D protein.	BnaA08g20480D protein.	0.509
BnaA03g10970D	BnaA09g39760D	A0A078HHA4	A0A078FAH6	BnaA03g10970D protein.	BnaA04g27270D protein.	0.509
BnaA03g10970D	BnaAnng27490D	A0A078HHA4	A0A078JPY0	BnaA03g10970D protein.	BnaAnng27490D protein.	0.691
BnaA03g10970D	BnaC03g72450D	A0A078HHA4	A0A078D4W1	BnaA03g10970D protein.	BnaC03g72450D protein.	0.509
BnaA03g10970D	BnaCnng30170D	A0A078HHA4	A0A078J066	BnaA03g10970D protein.	BnaCnng30170D protein.	0.509
BnaA06g20800D	BnaA02g08760D	A0A078G8V4	A0A078G5K2	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	BnaA02g08760D protein.	0.691
BnaA06g20800D	BnaA03g10970D	A0A078G8V4	A0A078HHA4	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	BnaA03g10970D protein.	0.691
BnaA06g20800D	BnaA07g09990D	A0A078G8V4	A0A078GMF0	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	BnaA07g09990D protein.	0.647
BnaA06g20800D	BnaA08g20480D	A0A078G8V4	A0A078HUN2	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	BnaA08g20480D protein.	0.647
BnaA06g20800D	BnaA09g39760D	A0A078G8V4	A0A078FAH6	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	BnaA04g27270D protein.	0.647
BnaA06g20800D	BnaA10g29080D	A0A078G8V4	A0A078JPC0	BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.	BnaA10g29080D protein.	0.691