11 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaA01g26990D	BnaA01g26990D protein. (133 aa)
	BnaA02g23730D	BnaA02g23730D protein. (367 aa)
	BnaC03g63980D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1181 aa)
	BnaC02g31180D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1166 aa)
	BnaAnng05440D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1166 aa)
	BnaC04g01050D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1168 aa)
	BnaC03g23920D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (790 aa)
	BnaA07g07580D	BnaA07g07580D protein. (224 aa)
	BnaA07g07550D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1184 aa)
	BnaCnng72590D	BnaCnng72590D protein. (141 aa)
	BnaCnng64900D	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (672 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA02g23730D	BnaA07g07550D	A0A078GMG2	A0A078I0V6	BnaA02g23730D protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaA02g23730D	BnaA07g07580D	A0A078GMG2	A0A078I046	BnaA02g23730D protein.	BnaA07g07580D protein.	0.846
BnaA02g23730D	BnaAnng05440D	A0A078GMG2	A0A078HRM1	BnaA02g23730D protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.543
BnaA02g23730D	BnaC02g31180D	A0A078GMG2	A0A078HFW0	BnaA02g23730D protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.542
BnaA07g07550D	BnaA02g23730D	A0A078I0V6	A0A078GMG2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA02g23730D protein.	0.838
BnaA07g07550D	BnaA07g07580D	A0A078I0V6	A0A078I046	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA07g07580D protein.	0.542
BnaA07g07550D	BnaAnng05440D	A0A078I0V6	A0A078HRM1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaA07g07550D	BnaC02g31180D	A0A078I0V6	A0A078HFW0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaA07g07580D	BnaA02g23730D	A0A078I046	A0A078GMG2	BnaA07g07580D protein.	BnaA02g23730D protein.	0.846
BnaA07g07580D	BnaA07g07550D	A0A078I046	A0A078I0V6	BnaA07g07580D protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.542
BnaA07g07580D	BnaAnng05440D	A0A078I046	A0A078HRM1	BnaA07g07580D protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaA07g07580D	BnaC02g31180D	A0A078I046	A0A078HFW0	BnaA07g07580D protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaAnng05440D	BnaA02g23730D	A0A078HRM1	A0A078GMG2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA02g23730D protein.	0.543
BnaAnng05440D	BnaA07g07550D	A0A078HRM1	A0A078I0V6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaAnng05440D	BnaA07g07580D	A0A078HRM1	A0A078I046	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA07g07580D protein.	0.838
BnaAnng05440D	BnaC02g31180D	A0A078HRM1	A0A078HFW0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.543
BnaC02g31180D	BnaA02g23730D	A0A078HFW0	A0A078GMG2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA02g23730D protein.	0.542
BnaC02g31180D	BnaA07g07550D	A0A078HFW0	A0A078I0V6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.838
BnaC02g31180D	BnaA07g07580D	A0A078HFW0	A0A078I046	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA07g07580D protein.	0.838
BnaC02g31180D	BnaAnng05440D	A0A078HFW0	A0A078HRM1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.543