7 items (Brassica napus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Predicted Interactions

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protein homology

Your Input:
	psbA	Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (353 aa)
	psaA	Photosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family. (750 aa)
	rpoA	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (327 aa)
	Gsa	Glutamate 1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (473 aa)
	BnaC01g27980D	BnaC01g27980D protein. (268 aa)
	BnaA09g04160D	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (721 aa)
	BnaA06g23200D	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (566 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA06g23200D	BnaA09g04160D	A0A078I2F0	A0A078G4X5	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.911
BnaA06g23200D	Gsa	A0A078I2F0	Q84TK5	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Glutamate 1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.769
BnaA06g23200D	rpoA	A0A078I2F0	D1L8S0	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.687
BnaA09g04160D	BnaA06g23200D	A0A078G4X5	A0A078I2F0	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.911
BnaA09g04160D	Gsa	A0A078G4X5	Q84TK5	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Glutamate 1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.759
BnaA09g04160D	rpoA	A0A078G4X5	D1L8S0	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.687
BnaC01g27980D	psaA	A0A078EGN5	D1L8N8	BnaC01g27980D protein.	Photosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family.	0.800
BnaC01g27980D	psbA	A0A078EGN5	D1L8L8	BnaC01g27980D protein.	Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.	0.887
BnaC01g27980D	rpoA	A0A078EGN5	D1L8S0	BnaC01g27980D protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.795
Gsa	BnaA06g23200D	Q84TK5	A0A078I2F0	Glutamate 1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.769
Gsa	BnaA09g04160D	Q84TK5	A0A078G4X5	Glutamate 1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.759
psaA	BnaC01g27980D	D1L8N8	A0A078EGN5	Photosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family.	BnaC01g27980D protein.	0.800
psaA	psbA	D1L8N8	D1L8L8	Photosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family.	Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.	0.961
psaA	rpoA	D1L8N8	D1L8S0	Photosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.789
psbA	BnaC01g27980D	D1L8L8	A0A078EGN5	Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.	BnaC01g27980D protein.	0.887
psbA	psaA	D1L8L8	D1L8N8	Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.	Photosystem I P700 chlorophyll a apoprotein A1; Belongs to the PsaA/PsaB family.	0.961
psbA	rpoA	D1L8L8	D1L8S0	Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.800
rpoA	BnaA06g23200D	D1L8S0	A0A078I2F0	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.687
rpoA	BnaA09g04160D	D1L8S0	A0A078G4X5	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.687
rpoA	BnaC01g27980D	D1L8S0	A0A078EGN5	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	BnaC01g27980D protein.	0.795