30 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaA05g33280D	BnaA05g33280D protein. (829 aa)
	BnaC04g37620D	BnaC04g37620D protein. (861 aa)
	BnaA09g35230D	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (727 aa)
	ZDS	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (561 aa)
	BnaAnng22360D	BnaAnng22360D protein. (442 aa)
	BnaC04g55570D	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (726 aa)
	BnaCnng40090D	BnaCnng40090D protein. (666 aa)
	BnaA03g18760D	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (715 aa)
	BnaA05g28020D	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (231 aa)
	BnaA03g47140D	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (216 aa)
	BnaC03g12710D	BnaC03g12710D protein. (951 aa)
	BnaA09g25050D	BnaA09g25050D protein. (440 aa)
	BnaA09g40820D	BnaA09g40820D protein. (877 aa)
	BnaC03g72600D	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (715 aa)
	BnaA03g52140D	BnaA03g52140D protein. (656 aa)
	BnaC04g05620D	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (717 aa)
	BnaA01g18180D	BnaA01g18180D protein. (428 aa)
	BnaA09g35800D	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (227 aa)
	BnaA07g00390D	BnaA07g00390D protein. (433 aa)
	BnaA07g03930D	BnaA07g03930D protein. (818 aa)
	BnaA06g36090D	BnaA06g36090D protein. (666 aa)
	BnaA01g14450D	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (213 aa)
	BnaA09g17910D	BnaA09g17910D protein. (657 aa)
	BnaA04g14740D	BnaA04g14740D protein. (860 aa)
	BnaA01g31350D	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (180 aa)
	BnaC06g27060D	BnaC06g27060D protein. (451 aa)
	BnaC05g46990D	Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. (561 aa)
	BnaCnng39330D	BnaCnng39330D protein. (380 aa)
	BnaC08g26550D	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (727 aa)
	BnaC01g22120D	BnaC01g22120D protein. (428 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g18180D	BnaA07g00390D	A0A078G8W6	A0A078H2D0	BnaA01g18180D protein.	BnaA07g00390D protein.	0.653
BnaA01g18180D	BnaAnng22360D	A0A078G8W6	A0A078JL47	BnaA01g18180D protein.	BnaAnng22360D protein.	0.662
BnaA01g18180D	BnaC01g22120D	A0A078G8W6	A0A078I284	BnaA01g18180D protein.	BnaC01g22120D protein.	0.652
BnaA01g18180D	BnaC03g12710D	A0A078G8W6	A0A078FBS3	BnaA01g18180D protein.	BnaC03g12710D protein.	0.662
BnaA01g18180D	BnaC06g27060D	A0A078G8W6	A0A078HLE9	BnaA01g18180D protein.	BnaC06g27060D protein.	0.679
BnaA01g18180D	BnaCnng39330D	A0A078G8W6	A0A078JCB3	BnaA01g18180D protein.	BnaCnng39330D protein.	0.663
BnaA03g18760D	BnaA09g35230D	A0A078EZV7	Q9AXN3	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
BnaA03g18760D	BnaC03g72600D	A0A078EZV7	A0A078JC38	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
BnaA03g18760D	BnaC04g05620D	A0A078EZV7	A0A078G6B4	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
BnaA03g18760D	BnaC04g55570D	A0A078EZV7	A0A078JDW4	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
BnaA03g18760D	BnaC08g26550D	A0A078EZV7	A0A078HWQ9	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.999
BnaA03g52140D	BnaA04g14740D	A0A078FK10	A0A078HEZ7	BnaA03g52140D protein.	BnaA04g14740D protein.	0.941
BnaA03g52140D	BnaA09g40820D	A0A078FK10	A0A078FE52	BnaA03g52140D protein.	BnaA09g40820D protein.	0.921
BnaA03g52140D	BnaC04g37620D	A0A078FK10	A0A078IZ08	BnaA03g52140D protein.	BnaC04g37620D protein.	0.941
BnaA04g14740D	BnaA03g52140D	A0A078HEZ7	A0A078FK10	BnaA04g14740D protein.	BnaA03g52140D protein.	0.941
BnaA07g00390D	BnaA01g18180D	A0A078H2D0	A0A078G8W6	BnaA07g00390D protein.	BnaA01g18180D protein.	0.653
BnaA07g00390D	BnaAnng22360D	A0A078H2D0	A0A078JL47	BnaA07g00390D protein.	BnaAnng22360D protein.	0.661
BnaA07g00390D	BnaC01g22120D	A0A078H2D0	A0A078I284	BnaA07g00390D protein.	BnaC01g22120D protein.	0.653
BnaA07g00390D	BnaC03g12710D	A0A078H2D0	A0A078FBS3	BnaA07g00390D protein.	BnaC03g12710D protein.	0.662
BnaA07g00390D	BnaC06g27060D	A0A078H2D0	A0A078HLE9	BnaA07g00390D protein.	BnaC06g27060D protein.	0.680