10 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaC05g00680D	BnaC05g00680D protein. (188 aa)
	BnaA09g44820D	BnaA09g44820D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (267 aa)
	BnaC01g35900D	BnaC01g35900D protein. (226 aa)
	BnaA06g12030D	BnaA06g12030D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (267 aa)
	BnaA07g00860D	Malic enzyme. (582 aa)
	BnaAnng07910D	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (498 aa)
	BnaA02g16380D	BnaA02g16380D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (266 aa)
	BnaCnng50290D	BnaCnng50290D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (266 aa)
	BnaAnng40060D	BnaAnng40060D protein. (127 aa)
	DHN1	BnaA09g43150D protein; Belongs to the plant dehydrin family. (183 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA02g16380D	BnaAnng40060D	A0A078IB11	A0A078JWW7	BnaA02g16380D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaAnng40060D protein.	0.619
BnaA02g16380D	BnaC01g35900D	A0A078IB11	A0A078GAW6	BnaA02g16380D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaC01g35900D protein.	0.678
BnaA02g16380D	BnaC05g00680D	A0A078IB11	A0A078FQP0	BnaA02g16380D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaC05g00680D protein.	0.571
BnaA02g16380D	DHN1	A0A078IB11	Q6JV12	BnaA02g16380D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaA09g43150D protein; Belongs to the plant dehydrin family.	0.518
BnaA06g12030D	BnaAnng40060D	A0A078GLU3	A0A078JWW7	BnaA06g12030D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaAnng40060D protein.	0.553
BnaA06g12030D	BnaC01g35900D	A0A078GLU3	A0A078GAW6	BnaA06g12030D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaC01g35900D protein.	0.601
BnaA06g12030D	BnaC05g00680D	A0A078GLU3	A0A078FQP0	BnaA06g12030D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaC05g00680D protein.	0.505
BnaA06g12030D	DHN1	A0A078GLU3	Q6JV12	BnaA06g12030D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaA09g43150D protein; Belongs to the plant dehydrin family.	0.513
BnaA07g00860D	BnaAnng40060D	A0A078HDQ6	A0A078JWW7	Malic enzyme.	BnaAnng40060D protein.	0.440
BnaA07g00860D	BnaC01g35900D	A0A078HDQ6	A0A078GAW6	Malic enzyme.	BnaC01g35900D protein.	0.473
BnaA07g00860D	BnaC05g00680D	A0A078HDQ6	A0A078FQP0	Malic enzyme.	BnaC05g00680D protein.	0.459
BnaA09g44820D	BnaAnng40060D	A0A078G8L6	A0A078JWW7	BnaA09g44820D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaAnng40060D protein.	0.556
BnaA09g44820D	BnaC01g35900D	A0A078G8L6	A0A078GAW6	BnaA09g44820D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaC01g35900D protein.	0.602
BnaA09g44820D	BnaC05g00680D	A0A078G8L6	A0A078FQP0	BnaA09g44820D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaC05g00680D protein.	0.508
BnaA09g44820D	DHN1	A0A078G8L6	Q6JV12	BnaA09g44820D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	BnaA09g43150D protein; Belongs to the plant dehydrin family.	0.518
BnaAnng07910D	BnaC05g00680D	A0A078I4V0	A0A078FQP0	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	BnaC05g00680D protein.	0.416
BnaAnng40060D	BnaA02g16380D	A0A078JWW7	A0A078IB11	BnaAnng40060D protein.	BnaA02g16380D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.619
BnaAnng40060D	BnaA06g12030D	A0A078JWW7	A0A078GLU3	BnaAnng40060D protein.	BnaA06g12030D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.553
BnaAnng40060D	BnaA07g00860D	A0A078JWW7	A0A078HDQ6	BnaAnng40060D protein.	Malic enzyme.	0.440
BnaAnng40060D	BnaA09g44820D	A0A078JWW7	A0A078G8L6	BnaAnng40060D protein.	BnaA09g44820D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.556