75 items (Brassica napus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BnaC03g36180D	BnaC03g36180D protein. (403 aa)
	BnaA03g01520D	BnaA03g01520D protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (349 aa)
	BnaA03g47110D	BnaA03g47110D protein. (312 aa)
	BnaA09g40430D	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. (495 aa)
	BnaC06g00620D	BnaC06g00620D protein; Belongs to the ALAD family. (400 aa)
	BnaA09g40440D	Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (294 aa)
	BnaC09g39160D	BnaC09g39160D protein. (418 aa)
	BnaA10g07300D	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. (404 aa)
	BnaA10g08760D	BnaA10g08760D protein. (534 aa)
	BnaA08g27540D	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. (398 aa)
	BnaA10g08850D	BnaA10g08850D protein. (257 aa)
	BnaA10g08780D	BnaA10g08780D protein; Belongs to the ALAD family. (406 aa)
	BnaC05g01120D	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (537 aa)
	BnaC01g23240D	BnaC01g23240D protein. (389 aa)
	BnaC05g01980D	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. (400 aa)
	BnaA10g10200D	BnaA10g10200D protein. (425 aa)
	BnaC03g30250D	BnaC03g30250D protein. (189 aa)
	BnaC01g24000D	BnaC01g24000D protein. (572 aa)
	BnaA09g04160D	BnaA09g04160D protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (721 aa)
	BnaC09g47630D	BnaC09g47630D protein. (382 aa)
	BnaC08g42480D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (526 aa)
	BnaA09g01420D	BnaA09g01420D protein. (181 aa)
	BnaC04g49670D	BnaC04g49670D protein. (420 aa)
	BnaC06g17920D	BnaC06g17920D protein. (281 aa)
	BnaA03g48610D	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. (633 aa)
	BnaC01g19630D	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily. (397 aa)
	BnaA04g25760D	BnaA04g25760D protein. (424 aa)
	BnaC09g15440D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (527 aa)
	BnaC07g16850D	BnaC06g27630D protein. (282 aa)
	BnaAnng03490D	BnaAnng03490D protein. (534 aa)
	BnaA06g13830D	BnaA06g13830D protein. (324 aa)
	BnaA09g50920D	BnaA09g50920D protein. (386 aa)
	BnaA01g14420D	BnaA01g14420D protein. (313 aa)
	BnaA09g27040D	BnaA09g27040D protein. (281 aa)
	BnaC04g32950D	BnaC04g32950D protein; Belongs to the precorrin methyltransferase family. (370 aa)
	BnaC08g05120D	BnaC08g05120D protein. (524 aa)
	BnaC01g28060D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (530 aa)
	BnaA09g14820D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (532 aa)
	BnaC05g15260D	BnaC05g15260D protein. (324 aa)
	BnaA07g28250D	Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (426 aa)
	BnaA09g14830D	BnaA09g14830D protein. (289 aa)
	BnaC01g20010D	BnaC01g20010D protein. (263 aa)
	BnaA01g12570D	BnaA01g12570D protein. (332 aa)
	BnaAnng06210D	BnaAnng06210D protein. (380 aa)
	BnaA06g22720D	BnaA06g22720D protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (473 aa)
	BnaC02g22900D	BnaC02g22900D protein. (466 aa)
	BnaA06g23200D	BnaA06g23200D protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (566 aa)
	BnaC02g01240D	BnaC02g01240D protein. (380 aa)
	BnaA07g12810D	BnaA07g12810D protein. (281 aa)
	BnaA08g02220D	BnaA08g02220D protein. (228 aa)
	BnaCnng14630D	BnaCnng14630D protein. (492 aa)
	BnaC04g03820D	BnaC04g03820D protein. (380 aa)
	BnaC06g00560D	BnaC06g00560D protein. (257 aa)
	BnaCnng19750D	BnaCnng19750D protein. (333 aa)
	BnaCnng20460D	BnaCnng20460D protein. (409 aa)
	BnaC08g47900D	BnaC08g47900D protein. (263 aa)
	BnaC03g72930D	BnaC03g72930D protein. (274 aa)
	BnaA08g30360D	BnaA08g30360D protein. (262 aa)
	BnaA09g57180D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (527 aa)
	BnaA03g58320D	Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. (423 aa)
	BnaCnng29210D	BnaCnng29210D protein. (264 aa)
	BnaC09g54390D	Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (508 aa)
	BnaC07g50080D	BnaC07g50080D protein. (261 aa)
	BnaC05g49040D	BnaC05g49040D protein. (465 aa)
	BnaC03g74650D	BnaC03g74650D protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (473 aa)
	BnaA01g35850D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (528 aa)
	BnaCnng43160D	BnaCnng43160D protein. (393 aa)
	BnaAnng19090D	BnaAnng19090D protein. (531 aa)
	BnaAnng25090D	BnaAnng25090D protein. (312 aa)
	BnaAnng28520D	BnaAnng28520D protein. (165 aa)
	BnaCnng70590D	Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family. (387 aa)
	BnaCnng72350D	BnaCnng72350D protein. (144 aa)
	BnaCnng70460D	BnaCnng70460D protein. (246 aa)
	BnaAnng38540D	BnaAnng38540D protein. (263 aa)
	Gsa	Glutamate 1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (473 aa)

Your Current Organism:

Brassica napus

NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BnaA01g12570D	BnaA03g01520D	A0A078HTU0	A0A078FDB2	BnaA01g12570D protein.	BnaA03g01520D protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.495
BnaA01g12570D	BnaA03g48610D	A0A078HTU0	A0A078GTL5	BnaA01g12570D protein.	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.	0.655
BnaA01g12570D	BnaA06g13830D	A0A078HTU0	A0A078GXT5	BnaA01g12570D protein.	BnaA06g13830D protein.	0.695
BnaA01g12570D	BnaA08g27540D	A0A078HTU0	A0A078FM18	BnaA01g12570D protein.	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.	0.655
BnaA01g12570D	BnaA10g07300D	A0A078HTU0	A0A078FIQ3	BnaA01g12570D protein.	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.	0.655
BnaA01g12570D	BnaA10g08760D	A0A078HTU0	A0A078FKK5	BnaA01g12570D protein.	BnaA10g08760D protein.	0.928
BnaA01g12570D	BnaAnng03490D	A0A078HTU0	A0A078GX05	BnaA01g12570D protein.	BnaAnng03490D protein.	0.525
BnaA01g12570D	BnaAnng19090D	A0A078HTU0	A0A078JFL2	BnaA01g12570D protein.	BnaAnng19090D protein.	0.928
BnaA01g12570D	BnaAnng25090D	A0A078HTU0	A0A078JLP9	BnaA01g12570D protein.	BnaAnng25090D protein.	0.488
BnaA01g12570D	BnaAnng28520D	A0A078HTU0	A0A078JT85	BnaA01g12570D protein.	BnaAnng28520D protein.	0.686
BnaA01g12570D	BnaC01g19630D	A0A078HTU0	A0A078GUT8	BnaA01g12570D protein.	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.	0.658
BnaA01g12570D	BnaC01g23240D	A0A078HTU0	A0A078FTN2	BnaA01g12570D protein.	BnaC01g23240D protein.	0.904
BnaA01g12570D	BnaC01g24000D	A0A078HTU0	A0A078G1A9	BnaA01g12570D protein.	BnaC01g24000D protein.	0.525
BnaA01g12570D	BnaC05g01980D	A0A078HTU0	A0A078FUP6	BnaA01g12570D protein.	NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.	0.655
BnaA01g12570D	BnaC05g15260D	A0A078HTU0	A0A078HP43	BnaA01g12570D protein.	BnaC05g15260D protein.	0.695
BnaA01g12570D	BnaC05g49040D	A0A078HTU0	A0A078JAE2	BnaA01g12570D protein.	BnaC05g49040D protein.	0.927
BnaA01g12570D	BnaC08g05120D	A0A078HTU0	A0A078HFZ5	BnaA01g12570D protein.	BnaC08g05120D protein.	0.928
BnaA01g12570D	BnaC09g39160D	A0A078HTU0	A0A078FHJ5	BnaA01g12570D protein.	BnaC09g39160D protein.	0.908
BnaA01g12570D	BnaCnng14630D	A0A078HTU0	A0A078IBW3	BnaA01g12570D protein.	BnaCnng14630D protein.	0.488
BnaA01g12570D	BnaCnng19750D	A0A078HTU0	A0A078ILD2	BnaA01g12570D protein.	BnaCnng19750D protein.	0.686