STRINGSTRING
BnaA07g25560D BnaA07g25560D BnaA02g06610D BnaA02g06610D BnaC09g12750D BnaC09g12750D BnaC03g34790D BnaC03g34790D BnaA05g26880D BnaA05g26880D BnaC05g04630D BnaC05g04630D BnaC03g71040D BnaC03g71040D BnaC03g35050D BnaC03g35050D BnaC07g34490D BnaC07g34490D BnaA03g01910D BnaA03g01910D BnaA02g12880D BnaA02g12880D BnaA09g43170D BnaA09g43170D BnaC04g29050D BnaC04g29050D BnaC03g57850D BnaC03g57850D BnaC02g23590D BnaC02g23590D BnaA08g13850D BnaA08g13850D BnaC09g40920D BnaC09g40920D BnaA08g03640D BnaA08g03640D BnaA04g12180D BnaA04g12180D BnaA10g09430D BnaA10g09430D BnaC09g41090D BnaC09g41090D BnaC04g02780D BnaC04g02780D BnaC08g21560D BnaC08g21560D BnaC05g02750D BnaC05g02750D BnaA09g03590D BnaA09g03590D BnaC09g31730D BnaC09g31730D BnaC09g00260D BnaC09g00260D BnaA01g33870D BnaA01g33870D BnaC03g30050D BnaC03g30050D BnaA08g25730D BnaA08g25730D BnaC08g14300D BnaC08g14300D BnaA01g18480D BnaA01g18480D BnaC09g47740D BnaC09g47740D BnaA06g37110D BnaA06g37110D BnaA09g00760D BnaA09g00760D BnaA09g01120D BnaA09g01120D BnaC01g39630D BnaC01g39630D BnaC04g49920D BnaC04g49920D BnaA05g30500D BnaA05g30500D BnaA08g15320D BnaA08g15320D BnaC06g06010D BnaC06g06010D BnaA02g10840D BnaA02g10840D BnaA02g24960D BnaA02g24960D BnaC07g32160D BnaC07g32160D BnaC09g28460D BnaC09g28460D BnaA09g27890D BnaA09g27890D BnaC01g40380D BnaC01g40380D BnaAnng03800D BnaAnng03800D BnaA08g26990D BnaA08g26990D BnaAnng03880D BnaAnng03880D BnaA10g13190D BnaA10g13190D BnaA07g00340D BnaA07g00340D BnaA01g19540D BnaA01g19540D BnaC02g26240D BnaC02g26240D BnaC03g27960D BnaC03g27960D BnaA06g10130D BnaA06g10130D BnaA06g10160D BnaA06g10160D BnaA07g01210D BnaA07g01210D BnaC02g06840D BnaC02g06840D BnaC01g10230D BnaC01g10230D BnaC03g26880D BnaC03g26880D BnaA09g10290D BnaA09g10290D BnaC05g11750D BnaC05g11750D BnaA04g13490D BnaA04g13490D BnaA09g35240D BnaA09g35240D BnaC02g33100D BnaC02g33100D BnaC05g11770D BnaC05g11770D BnaAnng06240D BnaAnng06240D BnaA09g38340D BnaA09g38340D BnaAnng06530D BnaAnng06530D BnaA05g32360D BnaA05g32360D BnaA08g00080D BnaA08g00080D BnaC02g01270D BnaC02g01270D BnaA07g12530D BnaA07g12530D BnaA02g29790D BnaA02g29790D BnaC03g16170D BnaC03g16170D BnaC02g17240D BnaC02g17240D BnaAnng09050D BnaAnng09050D BnaC06g12430D BnaC06g12430D BnaA09g42220D BnaA09g42220D BnaC04g05080D BnaC04g05080D BnaA03g06930D BnaA03g06930D BnaA03g47570D BnaA03g47570D BnaCnng18340D BnaCnng18340D BnaC02g46780D BnaC02g46780D BnaCnng19210D BnaCnng19210D BnaC02g39570D BnaC02g39570D BnaA08g31010D BnaA08g31010D BnaAnng11410D BnaAnng11410D BnaC03g76710D BnaC03g76710D BnaC03g71760D BnaC03g71760D BnaA04g28020D BnaA04g28020D BnaA06g01710D BnaA06g01710D BnaCnng27820D BnaCnng27820D BnaC08g47290D BnaC08g47290D BnaA02g36530D BnaA02g36530D BnaC05g51090D BnaC05g51090D BnaCnng32480D BnaCnng32480D BnaA10g28620D BnaA10g28620D BnaC03g73340D BnaC03g73340D BnaAnng14640D BnaAnng14640D BnaC01g42660D BnaC01g42660D BnaCnng34340D BnaCnng34340D BnaCnng38220D BnaCnng38220D BnaC01g42420D BnaC01g42420D BnaAnng18930D BnaAnng18930D BnaAnng20310D BnaAnng20310D BnaC06g42820D BnaC06g42820D BnaA09g56020D BnaA09g56020D BnaCnng52210D BnaCnng52210D BnaCnng62660D BnaCnng62660D BnaAnng25500D BnaAnng25500D BnaAnng32800D BnaAnng32800D BnaA10g29620D BnaA10g29620D BnaCnng63300D BnaCnng63300D BnaA03g56000D BnaA03g56000D BnaCnng69240D BnaCnng69240D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BnaA07g25560D60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (508 aa)
BnaA02g06610DBnaA02g06610D protein. (673 aa)
BnaC09g12750DBnaC09g12750D protein. (294 aa)
BnaC03g34790DBnaC03g34790D protein. (2202 aa)
BnaA05g26880DBnaA05g26880D protein. (450 aa)
BnaC05g04630DBnaC05g04630D protein. (1162 aa)
BnaC03g71040DBnaC03g71040D protein. (513 aa)
BnaC03g35050DBnaC03g35050D protein. (590 aa)
BnaC07g34490DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (285 aa)
BnaA03g01910DBnaA03g01910D protein. (533 aa)
BnaA02g12880DMidasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5046 aa)
BnaA09g43170DBnaA09g43170D protein. (977 aa)
BnaC04g29050DBnaC04g29050D protein. (804 aa)
BnaC03g57850DBnaC03g57850D protein. (793 aa)
BnaC02g23590D5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1030 aa)
BnaA08g13850DBnaA08g13850D protein. (644 aa)
BnaC09g40920DBnaC09g40920D protein. (1076 aa)
BnaA08g03640DBnaA08g03640D protein. (377 aa)
BnaA04g12180DBnaA04g12180D protein. (923 aa)
BnaA10g09430DGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (259 aa)
BnaC09g41090DBnaC09g41090D protein. (877 aa)
BnaC04g02780DBnaC04g02780D protein. (325 aa)
BnaC08g21560DBnaC08g21560D protein. (405 aa)
BnaC05g02750DNucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (658 aa)
BnaA09g03590DBnaA09g03590D protein. (535 aa)
BnaC09g31730DGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (224 aa)
BnaC09g00260DBnaC09g00260D protein. (227 aa)
BnaA01g33870DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (203 aa)
BnaC03g30050DBnaC03g30050D protein. (911 aa)
BnaA08g25730DRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1024 aa)
BnaC08g14300DRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1024 aa)
BnaA01g18480DBnaA01g18480D protein. (931 aa)
BnaC09g47740DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
BnaA06g37110D5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (993 aa)
BnaA09g00760DBnaA09g00760D protein. (769 aa)
BnaA09g01120DBnaA09g01120D protein. (226 aa)
BnaC01g39630D60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (509 aa)
BnaC04g49920DBnaC04g49920D protein. (1071 aa)
BnaA05g30500DBnaA05g30500D protein. (586 aa)
BnaA08g15320DBnaA08g15320D protein. (1049 aa)
BnaC06g06010DNuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (578 aa)
BnaA02g10840DBnaA02g10840D protein. (291 aa)
BnaA02g24960DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (277 aa)
BnaC07g32160DBnaC07g32160D protein. (455 aa)
BnaC09g28460DBnaC09g28460D protein. (201 aa)
BnaA09g27890DBnaA09g27890D protein. (1147 aa)
BnaC01g40380DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (202 aa)
BnaAnng03800DBnaAnng03800D protein. (412 aa)
BnaA08g26990DBnaA08g26990D protein. (576 aa)
BnaAnng03880DBnaAnng03880D protein; Belongs to the protein kinase superfamily. (333 aa)
BnaA10g13190DAdenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily. (413 aa)
BnaA07g00340DBnaA07g00340D protein. (64 aa)
BnaA01g19540DBnaA01g19540D protein. (456 aa)
BnaC02g26240DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
BnaC03g27960DBnaC03g27960D protein. (804 aa)
BnaA06g10130DBnaA06g10130D protein. (280 aa)
BnaA06g10160DBnaA06g10160D protein. (1571 aa)
BnaA07g01210DBnaA07g01210D protein. (800 aa)
BnaC02g06840DBnaC02g06840D protein. (868 aa)
BnaC01g10230DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (284 aa)
BnaC03g26880DBnaC03g26880D protein. (766 aa)
BnaA09g10290DBnaA09g10290D protein. (64 aa)
BnaC05g11750DBnaC05g11750D protein. (277 aa)
BnaA04g13490DBnaA04g13490D protein; Belongs to the protein kinase superfamily. (401 aa)
BnaA09g35240DEukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
BnaC02g33100DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (276 aa)
BnaC05g11770DBnaC05g11770D protein. (920 aa)
BnaAnng06240DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
BnaA09g38340DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (263 aa)
BnaAnng06530DBnaAnng06530D protein. (365 aa)
BnaA05g32360DBnaA05g32360D protein. (1037 aa)
BnaA08g00080DBnaA08g00080D protein. (519 aa)
BnaC02g01270DRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
BnaA07g12530DU3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (528 aa)
BnaA02g29790DBnaA02g29790D protein. (445 aa)
BnaC03g16170DBnaC03g16170D protein. (797 aa)
BnaC02g17240DBnaC02g17240D protein. (244 aa)
BnaAnng09050D5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1014 aa)
BnaC06g12430DBnaC06g12430D protein. (223 aa)
BnaA09g42220DBnaA09g42220D protein; Belongs to the protein kinase superfamily. (421 aa)
BnaC04g05080DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (268 aa)
BnaA03g06930DH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (199 aa)
BnaA03g47570DBnaA03g47570D protein. (313 aa)
BnaCnng18340DBnaCnng18340D protein. (1099 aa)
BnaC02g46780DBnaC02g46780D protein. (526 aa)
BnaCnng19210DBnaCnng19210D protein. (606 aa)
BnaC02g39570DBnaC02g39570D protein. (525 aa)
BnaA08g31010DBnaA08g31010D protein. (322 aa)
BnaAnng11410DBnaAnng11410D protein. (531 aa)
BnaC03g76710DBnaC03g76710D protein. (1049 aa)
BnaC03g71760DBnaC03g71760D protein. (350 aa)
BnaA04g28020DSerine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (541 aa)
BnaA06g01710DNuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (582 aa)
BnaCnng27820DBnaCnng27820D protein. (931 aa)
BnaC08g47290DBnaC08g47290D protein. (669 aa)
BnaA02g36530DBnaA02g36530D protein. (840 aa)
BnaC05g51090DBnaC05g51090D protein. (1152 aa)
BnaCnng32480DBnaCnng32480D protein. (530 aa)
BnaA10g28620DBnaA10g28620D protein. (377 aa)
BnaC03g73340DBnaC03g73340D protein. (505 aa)
BnaAnng14640DBnaAnng14640D protein. (512 aa)
BnaC01g42660DBnaC01g42660D protein; Belongs to the protein kinase superfamily. (333 aa)
BnaCnng34340DBnaCnng34340D protein. (515 aa)
BnaCnng38220DBnaCnng38220D protein. (658 aa)
BnaC01g42420DBnaC01g42420D protein. (455 aa)
BnaAnng18930DBnaAnng18930D protein. (521 aa)
BnaAnng20310DBnaAnng20310D protein. (196 aa)
BnaC06g42820DCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (267 aa)
BnaA09g56020DBnaA09g43720D protein. (64 aa)
BnaCnng52210DBnaCnng52210D protein. (513 aa)
BnaCnng62660DBnaCnng62660D protein. (639 aa)
BnaAnng25500DBnaAnng25500D protein. (107 aa)
BnaAnng32800DBnaAnng32800D protein. (357 aa)
BnaA10g29620DBnaA10g29620D protein. (666 aa)
BnaCnng63300DBnaCnng63300D protein. (452 aa)
BnaA03g56000DGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (227 aa)
BnaCnng69240DBnaCnng69240D protein. (172 aa)
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.