(17 nodes) Mixed, incl. Phospholipid transport, and Protein serine kinase activity network (Flavobacterium defluvii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

textmining

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protein homology

Your Input:
	SHG87330.1	Predicted glycosyl hydrolase, GH43/DUF377 family. (488 aa)
	SHH02368.1	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (321 aa)
	SHH64819.1	rsbT co-antagonist protein RsbR. (280 aa)
	SHH64850.1	rsbT antagonist protein RsbS. (132 aa)
	SHH64883.1	Serine/threonine-protein kinase RsbT. (138 aa)
	SHH64917.1	Anti-sigma regulatory factor (Ser/Thr protein kinase). (337 aa)
	SHH71122.1	Glycine/D-amino acid oxidase. (399 aa)
	SHH71150.1	Low affinity Fe/Cu permease. (163 aa)
	SHH71178.1	AsmA protein. (939 aa)
	SHH71212.1	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (282 aa)
	SHH71241.1	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (259 aa)
	SHH71269.1	phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family. (252 aa)
	SHH71331.1	Transcriptional regulator, TetR family. (185 aa)
	SHH71361.1	Glycosyltransferase involved in cell wall bisynthesis. (756 aa)
	SHH71393.1	Predicted glycosyl hydrolase, GH43/DUF377 family. (359 aa)
	SHH84028.1	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (253 aa)
	SHH84062.1	phospholipid/cholesterol/gamma-HCH transport system permease protein. (247 aa)

Your Current Organism:

Flavobacterium defluvii

NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHG87330.1	SHH71361.1	SAMN05443663_104164	SAMN05443663_11062	Predicted glycosyl hydrolase, GH43/DUF377 family.	Glycosyltransferase involved in cell wall bisynthesis.	0.789
SHH02368.1	SHH64819.1	SAMN05443663_10547	SAMN05443663_109108	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	rsbT co-antagonist protein RsbR.	0.858
SHH02368.1	SHH64850.1	SAMN05443663_10547	SAMN05443663_109109	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	rsbT antagonist protein RsbS.	0.858
SHH02368.1	SHH71212.1	SAMN05443663_10547	SAMN05443663_11057	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	0.924
SHH02368.1	SHH71241.1	SAMN05443663_10547	SAMN05443663_11058	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.	0.980
SHH02368.1	SHH71269.1	SAMN05443663_10547	SAMN05443663_11059	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.	0.985
SHH02368.1	SHH84028.1	SAMN05443663_10547	SAMN05443663_11330	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.	0.990
SHH02368.1	SHH84062.1	SAMN05443663_10547	SAMN05443663_11331	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	phospholipid/cholesterol/gamma-HCH transport system permease protein.	0.996
SHH64819.1	SHH02368.1	SAMN05443663_109108	SAMN05443663_10547	rsbT co-antagonist protein RsbR.	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	0.858
SHH64819.1	SHH64850.1	SAMN05443663_109108	SAMN05443663_109109	rsbT co-antagonist protein RsbR.	rsbT antagonist protein RsbS.	0.942
SHH64819.1	SHH64883.1	SAMN05443663_109108	SAMN05443663_109110	rsbT co-antagonist protein RsbR.	Serine/threonine-protein kinase RsbT.	0.996
SHH64819.1	SHH64917.1	SAMN05443663_109108	SAMN05443663_109111	rsbT co-antagonist protein RsbR.	Anti-sigma regulatory factor (Ser/Thr protein kinase).	0.996
SHH64819.1	SHH71212.1	SAMN05443663_109108	SAMN05443663_11057	rsbT co-antagonist protein RsbR.	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	0.858
SHH64819.1	SHH71241.1	SAMN05443663_109108	SAMN05443663_11058	rsbT co-antagonist protein RsbR.	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.	0.893
SHH64819.1	SHH71269.1	SAMN05443663_109108	SAMN05443663_11059	rsbT co-antagonist protein RsbR.	phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.	0.855
SHH64819.1	SHH84028.1	SAMN05443663_109108	SAMN05443663_11330	rsbT co-antagonist protein RsbR.	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.	0.893
SHH64819.1	SHH84062.1	SAMN05443663_109108	SAMN05443663_11331	rsbT co-antagonist protein RsbR.	phospholipid/cholesterol/gamma-HCH transport system permease protein.	0.855
SHH64850.1	SHH02368.1	SAMN05443663_109109	SAMN05443663_10547	rsbT antagonist protein RsbS.	phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.	0.858
SHH64850.1	SHH64819.1	SAMN05443663_109109	SAMN05443663_109108	rsbT antagonist protein RsbS.	rsbT co-antagonist protein RsbR.	0.942
SHH64850.1	SHH64883.1	SAMN05443663_109109	SAMN05443663_109110	rsbT antagonist protein RsbS.	Serine/threonine-protein kinase RsbT.	0.997

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