STRINGSTRING
SHF73545.1 SHF73545.1 SHF73589.1 SHF73589.1 SHF73632.1 SHF73632.1 SHF73677.1 SHF73677.1 SHF73719.1 SHF73719.1 SHF73768.1 SHF73768.1 SHF73807.1 SHF73807.1 SHF73938.1 SHF73938.1 SHF73978.1 SHF73978.1 SHF74025.1 SHF74025.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHF73545.1Protein of unknown function. (200 aa)
SHF73589.1Hypothetical protein. (280 aa)
SHF73632.1Hypothetical protein. (699 aa)
SHF73677.1Conserved hypothetical phage tail region protein. (142 aa)
SHF73719.1Conserved hypothetical phage tail region protein. (148 aa)
SHF73768.1Hypothetical protein. (52 aa)
SHF73807.1Hypothetical protein. (227 aa)
SHF73938.1Hypothetical protein. (136 aa)
SHF73978.1Baseplate J-like protein. (1059 aa)
SHF74025.1Hypothetical protein. (896 aa)
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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