STRINGSTRING
SHH26316.1 SHH26316.1 SHG84767.1 SHG84767.1 SHG93542.1 SHG93542.1 SHG92008.1 SHG92008.1 SHG90911.1 SHG90911.1 SHG81558.1 SHG81558.1 SHG22236.1 SHG22236.1 SHF75659.1 SHF75659.1 SHF78231.1 SHF78231.1 SHH84062.1 SHH84062.1 SHH71269.1 SHH71269.1 SHH42516.1 SHH42516.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHH26316.1Lipopolysaccharide export system permease protein. (485 aa)
SHG84767.1ATP-binding cassette, subfamily F, member 3. (544 aa)
SHG93542.1Lipopolysaccharide transport system permease protein. (288 aa)
SHG92008.1Lipopolysaccharide export system ATP-binding protein. (246 aa)
SHG90911.1ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components. (316 aa)
SHG81558.1Lipopolysaccharide export system permease protein. (362 aa)
SHG22236.1Molybdate transport system ATP-binding protein. (413 aa)
SHF75659.1ATP-binding cassette, subfamily F, member 3. (639 aa)
SHF78231.1Hypothetical protein. (342 aa)
SHH84062.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (247 aa)
SHH71269.1phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family. (252 aa)
SHH42516.1Hypothetical protein. (423 aa)
Your Current Organism:
Flavobacterium defluvii
NCBI taxonomy Id: 370979
Other names: DSM 17963, F. defluvii, Flavobacterium defluvii Park et al. 2007 emend. Chen et al. 2013, Flavobacterium sp. EMB117, KCTC 12612, strain EMB117
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