6 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SCNM1	Sodium channel modifier 1. (98 aa)
	CRIPT	Cysteine-rich PDZ-binding protein. (101 aa)
	RBM48	RNA-binding protein 48. (362 aa)
	AV530_017935	KOW domain-containing protein. (68 aa)
	ARMC7	Armadillo repeat-containing protein 7. (182 aa)
	AV530_011019	U-box domain-containing protein. (351 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARMC7	AV530_011019	A0A1V4KVZ1	A0A1V4L0E2	Armadillo repeat-containing protein 7.	U-box domain-containing protein.	0.779
ARMC7	AV530_017935	A0A1V4KVZ1	A0A1V4KCV9	Armadillo repeat-containing protein 7.	KOW domain-containing protein.	0.909
ARMC7	CRIPT	A0A1V4KVZ1	A0A1V4JJL5	Armadillo repeat-containing protein 7.	Cysteine-rich PDZ-binding protein.	0.907
ARMC7	RBM48	A0A1V4KVZ1	A0A1V4KBF7	Armadillo repeat-containing protein 7.	RNA-binding protein 48.	0.968
ARMC7	SCNM1	A0A1V4KVZ1	A0A1V4JD02	Armadillo repeat-containing protein 7.	Sodium channel modifier 1.	0.909
AV530_011019	ARMC7	A0A1V4L0E2	A0A1V4KVZ1	U-box domain-containing protein.	Armadillo repeat-containing protein 7.	0.779
AV530_011019	AV530_017935	A0A1V4L0E2	A0A1V4KCV9	U-box domain-containing protein.	KOW domain-containing protein.	0.848
AV530_011019	CRIPT	A0A1V4L0E2	A0A1V4JJL5	U-box domain-containing protein.	Cysteine-rich PDZ-binding protein.	0.598
AV530_011019	RBM48	A0A1V4L0E2	A0A1V4KBF7	U-box domain-containing protein.	RNA-binding protein 48.	0.597
AV530_011019	SCNM1	A0A1V4L0E2	A0A1V4JD02	U-box domain-containing protein.	Sodium channel modifier 1.	0.597
AV530_017935	ARMC7	A0A1V4KCV9	A0A1V4KVZ1	KOW domain-containing protein.	Armadillo repeat-containing protein 7.	0.909
AV530_017935	AV530_011019	A0A1V4KCV9	A0A1V4L0E2	KOW domain-containing protein.	U-box domain-containing protein.	0.848
AV530_017935	CRIPT	A0A1V4KCV9	A0A1V4JJL5	KOW domain-containing protein.	Cysteine-rich PDZ-binding protein.	0.660
AV530_017935	RBM48	A0A1V4KCV9	A0A1V4KBF7	KOW domain-containing protein.	RNA-binding protein 48.	0.660
AV530_017935	SCNM1	A0A1V4KCV9	A0A1V4JD02	KOW domain-containing protein.	Sodium channel modifier 1.	0.660
CRIPT	ARMC7	A0A1V4JJL5	A0A1V4KVZ1	Cysteine-rich PDZ-binding protein.	Armadillo repeat-containing protein 7.	0.907
CRIPT	AV530_011019	A0A1V4JJL5	A0A1V4L0E2	Cysteine-rich PDZ-binding protein.	U-box domain-containing protein.	0.598
CRIPT	AV530_017935	A0A1V4JJL5	A0A1V4KCV9	Cysteine-rich PDZ-binding protein.	KOW domain-containing protein.	0.660
CRIPT	RBM48	A0A1V4JJL5	A0A1V4KBF7	Cysteine-rich PDZ-binding protein.	RNA-binding protein 48.	0.685
CRIPT	SCNM1	A0A1V4JJL5	A0A1V4JD02	Cysteine-rich PDZ-binding protein.	Sodium channel modifier 1.	0.663