(10 nodes) Mixed, incl. Paraspeckles, and ROK, N-terminal network (Patagioenas fasciata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AV530_011567	B30.2/SPRY domain-containing protein. (143 aa)
	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3 isoform C. (693 aa)
	HNRNPM	Heterogeneous nuclear ribonucleoprotein M isoform A. (483 aa)
	AV530_009482	Uncharacterized protein. (237 aa)
	AV530_017637	RRM domain-containing protein. (91 aa)
	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B. (338 aa)
	AV530_014114	Heterogeneous nuclear ribonucleoprotein K. (428 aa)
	AV530_008914	Uncharacterized protein. (107 aa)
	RBMX	RNA-binding motif protein, X chromosome isoform A. (453 aa)
	AV530_002661	Heterogeneous nuclear ribonucleoprotein C-like. (219 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_002661	AV530_008914	A0A1V4KZR3	A0A1V4KK99	Heterogeneous nuclear ribonucleoprotein C-like.	Uncharacterized protein.	0.849
AV530_002661	AV530_009482	A0A1V4KZR3	A0A1V4JZM7	Heterogeneous nuclear ribonucleoprotein C-like.	Uncharacterized protein.	0.928
AV530_002661	AV530_011567	A0A1V4KZR3	A0A1V4J665	Heterogeneous nuclear ribonucleoprotein C-like.	B30.2/SPRY domain-containing protein.	0.849
AV530_002661	AV530_014114	A0A1V4KZR3	A0A1V4KDB9	Heterogeneous nuclear ribonucleoprotein C-like.	Heterogeneous nuclear ribonucleoprotein K.	0.976
AV530_002661	AV530_017637	A0A1V4KZR3	A0A1V4JZY1	Heterogeneous nuclear ribonucleoprotein C-like.	RRM domain-containing protein.	0.928
AV530_002661	HNRNPA2B1	A0A1V4KZR3	A0A1V4KC40	Heterogeneous nuclear ribonucleoprotein C-like.	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B.	0.969
AV530_002661	HNRNPA3	A0A1V4KZR3	A0A1V4JI93	Heterogeneous nuclear ribonucleoprotein C-like.	Heterogeneous nuclear ribonucleoprotein A3 isoform C.	0.929
AV530_002661	HNRNPM	A0A1V4KZR3	A0A1V4JZM4	Heterogeneous nuclear ribonucleoprotein C-like.	Heterogeneous nuclear ribonucleoprotein M isoform A.	0.928
AV530_002661	RBMX	A0A1V4KZR3	A0A1V4KYL9	Heterogeneous nuclear ribonucleoprotein C-like.	RNA-binding motif protein, X chromosome isoform A.	0.926
AV530_008914	AV530_002661	A0A1V4KK99	A0A1V4KZR3	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein C-like.	0.849
AV530_008914	AV530_009482	A0A1V4KK99	A0A1V4JZM7	Uncharacterized protein.	Uncharacterized protein.	0.780
AV530_008914	AV530_011567	A0A1V4KK99	A0A1V4J665	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.921
AV530_008914	AV530_014114	A0A1V4KK99	A0A1V4KDB9	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein K.	0.878
AV530_008914	AV530_017637	A0A1V4KK99	A0A1V4JZY1	Uncharacterized protein.	RRM domain-containing protein.	0.844
AV530_008914	HNRNPA2B1	A0A1V4KK99	A0A1V4KC40	Uncharacterized protein.	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B.	0.725
AV530_008914	HNRNPA3	A0A1V4KK99	A0A1V4JI93	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein A3 isoform C.	0.738
AV530_008914	HNRNPM	A0A1V4KK99	A0A1V4JZM4	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein M isoform A.	0.780
AV530_008914	RBMX	A0A1V4KK99	A0A1V4KYL9	Uncharacterized protein.	RNA-binding motif protein, X chromosome isoform A.	0.809
AV530_009482	AV530_002661	A0A1V4JZM7	A0A1V4KZR3	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein C-like.	0.928
AV530_009482	AV530_008914	A0A1V4JZM7	A0A1V4KK99	Uncharacterized protein.	Uncharacterized protein.	0.780