16 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AV530_008609	ThiF domain-containing protein. (229 aa)
	AV530_008610	ThiF domain-containing protein. (163 aa)
	KDM6A	Lysine-specific demethylase 6A isoform A. (1436 aa)
	UBL7	Ubiquitin-like protein 7 isoform B. (375 aa)
	UBE2K	Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	AV530_020194	Uncharacterized protein. (108 aa)
	BIRC6	Baculoviral IAP repeat-containing protein 6 isoform C. (4860 aa)
	AV530_013603	Ubiquitin-conjugating enzyme E2-18 kDa. (150 aa)
	UBE2L3	Ubiquitin-conjugating enzyme E2 L3 isoform A; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	AV530_009195	UBA_e1_C domain-containing protein. (89 aa)
	UBE2E3	Ubiquitin-conjugating enzyme E2 E3; Belongs to the ubiquitin-conjugating enzyme family. (207 aa)
	AV530_004200	2'-5'-oligoadenylate synthase 1. (518 aa)
	ZFAND4	AN1-type zinc finger protein 4. (702 aa)
	UBE2V1	Ubiquitin-conjugating enzyme E2 variant 1. (178 aa)
	UBA52	Ubiquitin-60S ribosomal protein L40. (128 aa)
	TRAF7	E3 ubiquitin-protein ligase TRAF7. (670 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_004200	AV530_008609	A0A1V4K8T1	A0A1V4J8H9	2'-5'-oligoadenylate synthase 1.	ThiF domain-containing protein.	0.801
AV530_004200	AV530_008610	A0A1V4K8T1	A0A1V4J8M6	2'-5'-oligoadenylate synthase 1.	ThiF domain-containing protein.	0.801
AV530_004200	AV530_009195	A0A1V4K8T1	A0A1V4K4X8	2'-5'-oligoadenylate synthase 1.	UBA_e1_C domain-containing protein.	0.801
AV530_004200	AV530_013603	A0A1V4K8T1	A0A1V4JPY1	2'-5'-oligoadenylate synthase 1.	Ubiquitin-conjugating enzyme E2-18 kDa.	0.894
AV530_004200	AV530_020194	A0A1V4K8T1	A0A1V4JFS4	2'-5'-oligoadenylate synthase 1.	Uncharacterized protein.	0.801
AV530_004200	BIRC6	A0A1V4K8T1	A0A1V4JJX5	2'-5'-oligoadenylate synthase 1.	Baculoviral IAP repeat-containing protein 6 isoform C.	0.994
AV530_004200	KDM6A	A0A1V4K8T1	A0A1V4JBQ3	2'-5'-oligoadenylate synthase 1.	Lysine-specific demethylase 6A isoform A.	0.830
AV530_004200	TRAF7	A0A1V4K8T1	A0A1V4KSU6	2'-5'-oligoadenylate synthase 1.	E3 ubiquitin-protein ligase TRAF7.	0.972
AV530_004200	UBA52	A0A1V4K8T1	A0A1V4KQG5	2'-5'-oligoadenylate synthase 1.	Ubiquitin-60S ribosomal protein L40.	0.974
AV530_004200	UBE2E3	A0A1V4K8T1	A0A1V4K8B1	2'-5'-oligoadenylate synthase 1.	Ubiquitin-conjugating enzyme E2 E3; Belongs to the ubiquitin-conjugating enzyme family.	0.771
AV530_004200	UBE2K	A0A1V4K8T1	A0A1V4JFR7	2'-5'-oligoadenylate synthase 1.	Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.	0.949
AV530_004200	UBE2L3	A0A1V4K8T1	A0A1V4JS29	2'-5'-oligoadenylate synthase 1.	Ubiquitin-conjugating enzyme E2 L3 isoform A; Belongs to the ubiquitin-conjugating enzyme family.	0.771
AV530_004200	UBE2V1	A0A1V4K8T1	A0A1V4KL43	2'-5'-oligoadenylate synthase 1.	Ubiquitin-conjugating enzyme E2 variant 1.	0.999
AV530_004200	UBL7	A0A1V4K8T1	A0A1V4JDC8	2'-5'-oligoadenylate synthase 1.	Ubiquitin-like protein 7 isoform B.	0.792
AV530_004200	ZFAND4	A0A1V4K8T1	A0A1V4KJ38	2'-5'-oligoadenylate synthase 1.	AN1-type zinc finger protein 4.	0.595
AV530_008609	AV530_004200	A0A1V4J8H9	A0A1V4K8T1	ThiF domain-containing protein.	2'-5'-oligoadenylate synthase 1.	0.801
AV530_008609	AV530_008610	A0A1V4J8H9	A0A1V4J8M6	ThiF domain-containing protein.	ThiF domain-containing protein.	0.900
AV530_008609	AV530_009195	A0A1V4J8H9	A0A1V4K4X8	ThiF domain-containing protein.	UBA_e1_C domain-containing protein.	0.896
AV530_008609	AV530_013603	A0A1V4J8H9	A0A1V4JPY1	ThiF domain-containing protein.	Ubiquitin-conjugating enzyme E2-18 kDa.	0.782
AV530_008609	AV530_020194	A0A1V4J8H9	A0A1V4JFS4	ThiF domain-containing protein.	Uncharacterized protein.	0.900