12 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAP2K4	Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. (381 aa)
	AV530_015360	Protein kinase domain-containing protein. (145 aa)
	AV530_009505	Uncharacterized protein. (253 aa)
	MAPK10	Mitogen-activated protein kinase. (540 aa)
	MAPK8IP2	C-Jun-amino-terminal kinase-interacting protein 2. (349 aa)
	MAPK8IP1	C-Jun-amino-terminal kinase-interacting protein 1. (613 aa)
	MAPK8	Mitogen-activated protein kinase. (427 aa)
	AV530_007050	CD209 antigen-like protein C. (353 aa)
	MAP3K1	Mitogen-activated protein kinase kinase kinase 1 isoform A. (1375 aa)
	MAPK8IP3	C-Jun-amino-terminal kinase-interacting protein 3 isoform B. (1301 aa)
	MAPK9	Mitogen-activated protein kinase. (424 aa)
	SPAG9	C-Jun-amino-terminal kinase-interacting protein 4 isoform B. (1321 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_007050	AV530_009505	A0A1V4KK70	A0A1V4JTV5	CD209 antigen-like protein C.	Uncharacterized protein.	0.775
AV530_007050	MAP2K4	A0A1V4KK70	A0A1V4J1W0	CD209 antigen-like protein C.	Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.	0.914
AV530_007050	MAP3K1	A0A1V4KK70	A0A1V4KRQ5	CD209 antigen-like protein C.	Mitogen-activated protein kinase kinase kinase 1 isoform A.	0.928
AV530_007050	MAPK10	A0A1V4KK70	A0A1V4JUT6	CD209 antigen-like protein C.	Mitogen-activated protein kinase.	0.949
AV530_007050	MAPK8	A0A1V4KK70	A0A1V4KJ95	CD209 antigen-like protein C.	Mitogen-activated protein kinase.	0.949
AV530_007050	MAPK8IP1	A0A1V4KK70	A0A1V4KEM5	CD209 antigen-like protein C.	C-Jun-amino-terminal kinase-interacting protein 1.	0.914
AV530_007050	MAPK8IP2	A0A1V4KK70	A0A1V4K4F7	CD209 antigen-like protein C.	C-Jun-amino-terminal kinase-interacting protein 2.	0.914
AV530_007050	MAPK8IP3	A0A1V4KK70	A0A1V4KT95	CD209 antigen-like protein C.	C-Jun-amino-terminal kinase-interacting protein 3 isoform B.	0.933
AV530_007050	MAPK9	A0A1V4KK70	A0A1V4KUP0	CD209 antigen-like protein C.	Mitogen-activated protein kinase.	0.949
AV530_007050	SPAG9	A0A1V4KK70	A0A1V4KXF5	CD209 antigen-like protein C.	C-Jun-amino-terminal kinase-interacting protein 4 isoform B.	0.933
AV530_009505	AV530_007050	A0A1V4JTV5	A0A1V4KK70	Uncharacterized protein.	CD209 antigen-like protein C.	0.775
AV530_009505	AV530_015360	A0A1V4JTV5	A0A1V4JT96	Uncharacterized protein.	Protein kinase domain-containing protein.	0.775
AV530_009505	MAPK10	A0A1V4JTV5	A0A1V4JUT6	Uncharacterized protein.	Mitogen-activated protein kinase.	0.738
AV530_009505	MAPK8	A0A1V4JTV5	A0A1V4KJ95	Uncharacterized protein.	Mitogen-activated protein kinase.	0.738
AV530_009505	MAPK8IP1	A0A1V4JTV5	A0A1V4KEM5	Uncharacterized protein.	C-Jun-amino-terminal kinase-interacting protein 1.	0.784
AV530_009505	MAPK8IP2	A0A1V4JTV5	A0A1V4K4F7	Uncharacterized protein.	C-Jun-amino-terminal kinase-interacting protein 2.	0.643
AV530_009505	MAPK8IP3	A0A1V4JTV5	A0A1V4KT95	Uncharacterized protein.	C-Jun-amino-terminal kinase-interacting protein 3 isoform B.	0.473
AV530_009505	MAPK9	A0A1V4JTV5	A0A1V4KUP0	Uncharacterized protein.	Mitogen-activated protein kinase.	0.738
AV530_009505	SPAG9	A0A1V4JTV5	A0A1V4KXF5	Uncharacterized protein.	C-Jun-amino-terminal kinase-interacting protein 4 isoform B.	0.473
AV530_015360	AV530_009505	A0A1V4JT96	A0A1V4JTV5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.775