STRINGSTRING
AV530_004197 AV530_004197 BHLHE40 BHLHE40 AV530_014737 AV530_014737 BRCA2 BRCA2 ZBTB1 ZBTB1 AV530_011467 AV530_011467 AV530_013168 AV530_013168 AV530_016371 AV530_016371 PRKAA1 PRKAA1 MSH2 MSH2 SLC1A2 SLC1A2 CRY2 CRY2 INO80 INO80 DDB2 DDB2 EIF2S1 EIF2S1 SLC1A3 SLC1A3 BMF BMF EIF2AK4 EIF2AK4 IMPACT IMPACT TP53INP1 TP53INP1 NPS NPS CASP7 CASP7 PDE6C PDE6C MAPK8 MAPK8 RGR RGR OPN4 OPN4 SIRT1 SIRT1 MMP9 MMP9 AV530_000617 AV530_000617 APP APP CUL4A CUL4A AV530_016784 AV530_016784 ERCC5 ERCC5 FBXL3 FBXL3 XPA XPA CHEK1 CHEK1 DBH DBH AV530_001933 AV530_001933 TRIM32 TRIM32 DRD2 DRD2 TTC36 TTC36 NETO1 NETO1 EP300 EP300 RHNO1 RHNO1 RS1 RS1 AV530_019284 AV530_019284 KDM1A KDM1A AV530_019282 AV530_019282 FBXL22 FBXL22 GNB5 GNB5 AV530_017169 AV530_017169 UVSSA UVSSA CDK5 CDK5 PRIMPOL PRIMPOL XPC XPC RHO RHO SDE2 SDE2 DTL DTL OGG1 OGG1 POLH POLH ZRANB3 ZRANB3 CACNB4 CACNB4 ERCC4 ERCC4 PER2 PER2 RHBDD1 RHBDD1 ATR ATR AV530_003533 AV530_003533 AV530_003532 AV530_003532 AV530_003534 AV530_003534 ERCC6 ERCC6 AV530_011701 AV530_011701 ATOH7 ATOH7 DHX36 DHX36 IL12A IL12A FBXL12 FBXL12 USF1 USF1 ZZEF1 ZZEF1 CTNS CTNS OPNP OPNP IFT20 IFT20 MMP2 MMP2 AV530_006932 AV530_006932 FBXL8 FBXL8 RGS9BP RGS9BP AV530_007031 AV530_007031 AQP1 AQP1 CHRNB2 CHRNB2 GPR88 GPR88 CRB1 CRB1 TROVE2 TROVE2 BCL2 BCL2 USP1 USP1 SEMA5A SEMA5A ERCC2 ERCC2 MAPK10 MAPK10 SLC7A11 SLC7A11 RRH RRH AV530_011830 AV530_011830 PPID PPID PPP1CC PPP1CC PPP1R1B PPP1R1B CCND1 CCND1 CABP4 CABP4 PPP1CA PPP1CA CAT CAT USP47 USP47 ABCC8 ABCC8 AV530_005992 AV530_005992 AV530_005968 AV530_005968 HSF2 HSF2 AV530_005777 AV530_005777 PTPRK PTPRK MAP3K4 MAP3K4 POLD3 POLD3 UBE4B UBE4B NOC2L NOC2L MAD2L2 MAD2L2 CASP9 CASP9 AV530_000431 AV530_000431 REEP6 REEP6 CRTC1 CRTC1 TMEM161A TMEM161A PRPH2 PRPH2 SPRTN SPRTN OPN3 OPN3 AV530_009527 AV530_009527 AV530_002761 AV530_002761 OPN1SW OPN1SW ERCC8 ERCC8 SIRT6 SIRT6 DCUN1D3 DCUN1D3 CREBBP CREBBP AV530_001106 AV530_001106 FBXL21 FBXL21 UBE2B UBE2B GRIN2A GRIN2A MYC MYC NOG NOG AANAT AANAT IL12B-2 IL12B-2 AV530_018984 AV530_018984 OPN1MSW OPN1MSW AV530_019065 AV530_019065 BAK1 BAK1 TANC1 TANC1 AV530_001476 AV530_001476 AV530_001475 AV530_001475 GUCA1A GUCA1A AV530_003886 AV530_003886 AV530_003887 AV530_003887 SEMA5B SEMA5B WRN WRN AV530_004549 AV530_004549 TYR TYR POLK POLK AV530_017641 AV530_017641 HMGCR HMGCR UBE2A UBE2A ERCC3 ERCC3 SLC4A10 SLC4A10 AV530_008316 AV530_008316 AV530_010801 AV530_010801 CRY1 CRY1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AV530_004197Hyaluronidase. (549 aa)
BHLHE40Class E basic helix-loop-helix protein 40. (413 aa)
AV530_014737HELICc2 domain-containing protein. (147 aa)
BRCA2Breast cancer type 2 susceptibility protein isoform C. (3432 aa)
ZBTB1Zinc finger and BTB domain-containing protein 1 isoform B. (575 aa)
AV530_011467Uncharacterized protein. (203 aa)
AV530_013168G_PROTEIN_RECEP_F1_2 domain-containing protein. (216 aa)
AV530_016371F-box/LRR-repeat protein 12-like. (284 aa)
PRKAA1Non-specific serine/threonine protein kinase. (796 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (936 aa)
SLC1A2Amino acid transporter. (575 aa)
CRY2Cryptochrome-2. (624 aa)
INO80DNA helicase INO80. (1471 aa)
DDB2DNA damage-binding protein 2 isoform B. (516 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1. (295 aa)
SLC1A3Amino acid transporter. (530 aa)
BMFBcl-2-modifying factor isoform A. (318 aa)
EIF2AK4Eukaryotic translation initiation factor 2-alpha kinase 4. (1604 aa)
IMPACTProtein IMPACT isoform A. (327 aa)
TP53INP1Tumor protein p53-inducible nuclear protein 1. (237 aa)
NPSNeuropeptide S. (131 aa)
CASP7Caspase-7 isoform B; Belongs to the peptidase C14A family. (320 aa)
PDE6CPhosphodiesterase. (864 aa)
MAPK8Mitogen-activated protein kinase. (427 aa)
RGRRPE-retinal G protein-coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (295 aa)
OPN4Melanopsin. (565 aa)
SIRT1NAD-dependent protein deacetylase sirtuin-1. (606 aa)
MMP9Matrix metalloproteinase-9. (691 aa)
AV530_000617Leucine-rich repeat neuronal protein 4. (880 aa)
APPAmyloid beta A4 protein. (746 aa)
CUL4ACullin-4A; Belongs to the cullin family. (770 aa)
AV530_016784Opsin-3-like. (346 aa)
ERCC5DNA repair protein complementing XP-G cells. (1128 aa)
FBXL3F-box/LRR-repeat protein 3. (357 aa)
XPADNA repair protein complementing XP-A cells. (180 aa)
CHEK1Serine/threonine-protein kinase Chk1; Belongs to the protein kinase superfamily. (476 aa)
DBHDopamine beta-hydroxylase isoform B. (639 aa)
AV530_001933Uncharacterized protein. (124 aa)
TRIM32E3 ubiquitin-protein ligase TRIM32. (647 aa)
DRD2D(2) dopamine receptor; Belongs to the G-protein coupled receptor 1 family. (487 aa)
TTC36Tetratricopeptide repeat protein 36. (223 aa)
NETO1Neuropilin and tolloid-like protein 1 isoform A. (533 aa)
EP300Histone acetyltransferase p300. (1778 aa)
RHNO1RAD9, HUS1, RAD1-interacting nuclear protein 1. (277 aa)
RS1Retinoschisin. (224 aa)
AV530_019284Protein PML. (842 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (776 aa)
AV530_019282Protein PML. (595 aa)
FBXL22F-box and leucine-rich protein 22. (189 aa)
GNB5Guanine nucleotide-binding protein subunit beta-5. (336 aa)
AV530_017169Uncharacterized protein. (338 aa)
UVSSAUV-stimulated scaffold protein A isoform A. (429 aa)
CDK5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
PRIMPOLDNA-directed primase/polymerase protein isoform A. (578 aa)
XPCDNA repair protein complementing XP-C cells. (959 aa)
RHORhodopsin. (351 aa)
SDE2SDE2-like protein. (415 aa)
DTLDenticleless protein-like protein. (725 aa)
OGG1N-glycosylase/DNA lyase. (352 aa)
POLHDNA polymerase eta. (689 aa)
ZRANB3DNA annealing helicase and endonuclease ZRANB3. (1115 aa)
CACNB4Voltage-dependent L-type calcium channel subunit beta-4 isoform A. (527 aa)
ERCC4DNA repair endonuclease XPF. (961 aa)
PER2Period circadian protein-like protein 2. (1308 aa)
RHBDD1Rhomboid-related protein 4. (190 aa)
ATRSerine/threonine-protein kinase ATR isoform A; Belongs to the PI3/PI4-kinase family. (2619 aa)
AV530_003533Uncharacterized protein. (332 aa)
AV530_003532Uncharacterized protein. (1038 aa)
AV530_003534Uncharacterized protein. (522 aa)
ERCC6DNA excision repair protein ERCC-6. (1554 aa)
AV530_011701Cryptochrome DASH-like. (600 aa)
ATOH7Atonal-like protein 7. (151 aa)
DHX36ATP-dependent RNA helicase DHX36. (997 aa)
IL12AInterleukin-12 subunit alpha; Belongs to the IL-6 superfamily. (162 aa)
FBXL12F-box/LRR-repeat protein 12. (281 aa)
USF1Upstream stimulatory factor 1 isoform B. (310 aa)
ZZEF1Zinc finger ZZ-type and EF-hand domain-containing protein 1. (1051 aa)
CTNSCystinosin. (402 aa)
OPNPPinopsin. (349 aa)
IFT20Intraflagellar transport 20-like protein. (132 aa)
MMP2Type IV collagenase. (661 aa)
AV530_006932Neur_chan_LBD domain-containing protein. (116 aa)
FBXL8F-box/LRR-repeat protein 8. (379 aa)
RGS9BPRegulator of G-protein signaling 9-binding protein. (237 aa)
AV530_007031Uncharacterized protein. (93 aa)
AQP1Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
CHRNB2Neuronal acetylcholine receptor subunit beta-2. (665 aa)
GPR88Putative G-protein coupled receptor 88. (298 aa)
CRB1Crumbs-like protein 1 isoform A. (1429 aa)
TROVE2SS-A/Ro ribonucleoprotein. (551 aa)
BCL2Apoptosis regulator Bcl-2. (235 aa)
USP1Ubiquitin carboxyl-terminal hydrolase. (795 aa)
SEMA5ASemaphorin-5A. (1077 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (198 aa)
MAPK10Mitogen-activated protein kinase. (540 aa)
SLC7A11Cystine/glutamate transporter isoform B. (503 aa)
RRHVisual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family. (527 aa)
AV530_011830Melanopsin. (615 aa)
PPIDPeptidyl-prolyl cis-trans isomerase D. (370 aa)
PPP1CCSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (595 aa)
PPP1R1BProtein phosphatase 1 regulatory subunit 1B. (275 aa)
CCND1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
CABP4Calcium-binding protein 4. (224 aa)
PPP1CASerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
CATCatalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (528 aa)
USP47Ubiquitin carboxyl-terminal hydrolase 47 isoform A; Belongs to the peptidase C19 family. (1375 aa)
ABCC8ATP-binding cassette sub-family C member 8. (1594 aa)
AV530_005992Opsin-5. (308 aa)
AV530_005968Opsin-5-like. (209 aa)
HSF2Heat shock factor protein 2 isoform A. (563 aa)
AV530_005777Uncharacterized protein. (211 aa)
PTPRKReceptor-type tyrosine-protein phosphatase kappa isoform A. (1456 aa)
MAP3K4Mitogen-activated protein kinase kinase kinase 4 isoform A. (1561 aa)
POLD3DNA polymerase delta subunit 3 isoform B. (405 aa)
UBE4BUbiquitin conjugation factor E4 B. (1170 aa)
NOC2LNucleolar complex 2-like protein. (787 aa)
MAD2L2Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
CASP9Caspase-9; Belongs to the peptidase C14A family. (335 aa)
AV530_000431G_PROTEIN_RECEP_F1_2 domain-containing protein. (132 aa)
REEP6Receptor expression-enhancing protein. (188 aa)
CRTC1CREB-regulated transcription coactivator 1 isoform A. (650 aa)
TMEM161ATransmembrane protein 161A. (477 aa)
PRPH2Peripherin-2. (354 aa)
SPRTNSprT-like domain-containing protein Spartan. (407 aa)
OPN3Opsin-3 isoform B. (402 aa)
AV530_009527Guanylyl cyclase-activating protein 1. (188 aa)
AV530_002761G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (100 aa)
OPN1SWShort-wave-sensitive opsin 1; Belongs to the G-protein coupled receptor 1 family. (173 aa)
ERCC8DNA excision repair protein ERCC-8 isoform B. (434 aa)
SIRT6NAD-dependent protein deacetylase sirtuin-6. (357 aa)
DCUN1D3DCN1-like protein. (304 aa)
CREBBPCREB-binding protein isoform C. (2618 aa)
AV530_001106TAZ-type domain-containing protein. (473 aa)
FBXL21F-box/LRR-repeat protein 21. (437 aa)
UBE2BUbiquitin-conjugating enzyme E2 B isoform C; Belongs to the ubiquitin-conjugating enzyme family. (222 aa)
GRIN2AGlutamate receptor, ionotropic, N-methyl D-aspartate 2A. (1332 aa)
MYCMyc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (432 aa)
NOGNoggin; Belongs to the noggin family. (223 aa)
AANATSerotonin N-acetyltransferase. (205 aa)
IL12B-2Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (484 aa)
AV530_018984Mitogen-activated protein kinase. (365 aa)
OPN1MSWRhodopsin. (355 aa)
AV530_019065Cryptochrome-1. (525 aa)
BAK1Bcl-2-like proteinous antagonist/killer. (320 aa)
TANC1Protein TANC1. (1076 aa)
AV530_001476Uncharacterized protein; Belongs to the MT-A70-like family. (66 aa)
AV530_001475Uncharacterized protein; Belongs to the MT-A70-like family. (104 aa)
GUCA1AGuanylyl cyclase-activating protein 1. (199 aa)
AV530_003886Cullin domain-containing protein; Belongs to the cullin family. (200 aa)
AV530_003887CULLIN_2 domain-containing protein; Belongs to the cullin family. (614 aa)
SEMA5BSemaphorin-5B. (1092 aa)
WRNWerner syndrome ATP-dependent helicase isoform B. (1720 aa)
AV530_004549RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (265 aa)
TYRTyrosinase. (529 aa)
POLKDNA polymerase kappa isoform B. (944 aa)
AV530_017641HELICc2 domain-containing protein. (68 aa)
HMGCR3-hydroxy-3-methylglutaryl coenzyme A reductase. (935 aa)
UBE2AUbiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (780 aa)
SLC4A10Anion exchange protein. (1096 aa)
AV530_008316Vertebrate ancient opsin. (386 aa)
AV530_010801Cystine/glutamate transporter. (474 aa)
CRY1Cryptochrome-1. (608 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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