9 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	UBA52	Ubiquitin-60S ribosomal protein L40. (128 aa)
	SUMO2	Small ubiquitin-related modifier. (95 aa)
	AV530_010142	Small ubiquitin-related modifier. (102 aa)
	ATG12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (142 aa)
	URM1	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...] (101 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	SUMO1	Small ubiquitin-related modifier. (101 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	AV530_016370	Ubiquitin-like domain-containing protein. (73 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATG12	URM1	A0A1V4JKC2	A0A1V4J751	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...]	0.508
AV530_010142	AV530_016370	A0A1V4JSQ0	A0A1V4KDQ4	Small ubiquitin-related modifier.	Ubiquitin-like domain-containing protein.	0.416
AV530_010142	RPS27A	A0A1V4JSQ0	A0A1V4IG00	Small ubiquitin-related modifier.	Ubiquitin-40S ribosomal protein S27a.	0.782
AV530_010142	SUMO1	A0A1V4JSQ0	A0A1V4JX72	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.902
AV530_010142	UBA52	A0A1V4JSQ0	A0A1V4KQG5	Small ubiquitin-related modifier.	Ubiquitin-60S ribosomal protein L40.	0.820
AV530_010142	UBC	A0A1V4JSQ0	A0A1V4K2F8	Small ubiquitin-related modifier.	Polyubiquitin-C isoform A.	0.822
AV530_016370	AV530_010142	A0A1V4KDQ4	A0A1V4JSQ0	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.416
AV530_016370	SUMO2	A0A1V4KDQ4	A0A1V4KWD6	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.416
RPS27A	AV530_010142	A0A1V4IG00	A0A1V4JSQ0	Ubiquitin-40S ribosomal protein S27a.	Small ubiquitin-related modifier.	0.782
RPS27A	SUMO1	A0A1V4IG00	A0A1V4JX72	Ubiquitin-40S ribosomal protein S27a.	Small ubiquitin-related modifier.	0.765
RPS27A	SUMO2	A0A1V4IG00	A0A1V4KWD6	Ubiquitin-40S ribosomal protein S27a.	Small ubiquitin-related modifier.	0.782
RPS27A	UBA52	A0A1V4IG00	A0A1V4KQG5	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-60S ribosomal protein L40.	0.999
RPS27A	UBC	A0A1V4IG00	A0A1V4K2F8	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin-C isoform A.	0.996
SUMO1	AV530_010142	A0A1V4JX72	A0A1V4JSQ0	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.902
SUMO1	RPS27A	A0A1V4JX72	A0A1V4IG00	Small ubiquitin-related modifier.	Ubiquitin-40S ribosomal protein S27a.	0.765
SUMO1	SUMO2	A0A1V4JX72	A0A1V4KWD6	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.902
SUMO1	UBA52	A0A1V4JX72	A0A1V4KQG5	Small ubiquitin-related modifier.	Ubiquitin-60S ribosomal protein L40.	0.806
SUMO1	UBC	A0A1V4JX72	A0A1V4K2F8	Small ubiquitin-related modifier.	Polyubiquitin-C isoform A.	0.788
SUMO2	AV530_016370	A0A1V4KWD6	A0A1V4KDQ4	Small ubiquitin-related modifier.	Ubiquitin-like domain-containing protein.	0.416
SUMO2	RPS27A	A0A1V4KWD6	A0A1V4IG00	Small ubiquitin-related modifier.	Ubiquitin-40S ribosomal protein S27a.	0.782