STRINGSTRING
USP13 USP13 SPOPL SPOPL XRCC5 XRCC5 RALB RALB TANK TANK AV530_008919 AV530_008919 AV530_008920 AV530_008920 CCT2 CCT2 FBXO7 FBXO7 BID BID SMAD7 SMAD7 FHIT FHIT SPG20 SPG20 DNM1L DNM1L AV530_012142 AV530_012142 AUP1 AUP1 CUL5 CUL5 JKAMP JKAMP RTN1 RTN1 TRAF3 TRAF3 ATXN3 ATXN3 AV530_014664 AV530_014664 PSMA3 PSMA3 ASB4 ASB4 BAG5 BAG5 SNCAIP SNCAIP CUL9 CUL9 FAF1 FAF1 SCAMP3 SCAMP3 AV530_000404 AV530_000404 SMG5 SMG5 PRR5L PRR5L AV530_013971 AV530_013971 TRAF6 TRAF6 LYN LYN AMBRA1 AMBRA1 LAPTM4B LAPTM4B YWHAZ YWHAZ DERL1 DERL1 BAG4 BAG4 ERLIN2 ERLIN2 AV530_015727 AV530_015727 SLF2 SLF2 VCL VCL CACUL1 CACUL1 HM13 HM13 CD40 CD40 CUL2 CUL2 FZD8 FZD8 SYT11 SYT11 TXNIP TXNIP AV530_011239 AV530_011239 SKI SKI UBE2J2 UBE2J2 TNFRSF1B TNFRSF1B MFN2 MFN2 TNFRSF8 TNFRSF8 MUL1 MUL1 PINK1 PINK1 TRAF2 TRAF2 AV530_014730 AV530_014730 PIAS4 PIAS4 UBA52 UBA52 AV530_009009 AV530_009009 FAM178B FAM178B PRKAR1B PRKAR1B UBXN7 UBXN7 AV530_010985 AV530_010985 AXIN1 AXIN1 SQSTM1 SQSTM1 FAF2 FAF2 CAMLG CAMLG UBE2B UBE2B TRIB1 TRIB1 PRKAR1A PRKAR1A AXIN2 AXIN2 UBE2T UBE2T YOD1 YOD1 RALA RALA FATE1 FATE1 AV530_003886 AV530_003886 AV530_003887 AV530_003887 UBE2A UBE2A AV530_016124 AV530_016124 AV530_003871 AV530_003871 FZD5 FZD5 STX8 STX8 HSPD1 HSPD1 ANKRA2 ANKRA2 USP19 USP19 SLF1 SLF1 PRKAR2A PRKAR2A LAPTM5 LAPTM5 AV530_004682 AV530_004682 NDUFS2 NDUFS2 UBOX5 UBOX5 UBE2K UBE2K PPARGC1A PPARGC1A PACRGL PACRGL WFS1 WFS1 SMAD6 SMAD6 DET1 DET1 ARIH1 ARIH1 AV530_019282 AV530_019282 AV530_019284 AV530_019284 UBASH3A UBASH3A AICDA AICDA TPI1 TPI1 GABARAPL1 GABARAPL1 TMBIM6 TMBIM6 RANGAP1 RANGAP1 UBASH3B UBASH3B ANAPC2 ANAPC2 RB1 RB1 ARRDC1 ARRDC1 AV530_002121 AV530_002121 HSPA5 HSPA5 TRAF1 TRAF1 RPS27A RPS27A RTN4 RTN4 FANCL FANCL AV530_004421 AV530_004421 BLZF1 BLZF1 CUL4A CUL4A AV530_000488 AV530_000488 DDX58 DDX58 MAP1LC3C MAP1LC3C SNX9 SNX9 PACRG PACRG SHPRH SHPRH PA2G4 PA2G4 AV530_014708 AV530_014708 LRPPRC LRPPRC TRAF5 TRAF5 RAD18 RAD18 CACYBP CACYBP AV530_004017 AV530_004017 AV530_014171 AV530_014171 MC4R MC4R CASP10 CASP10 AV530_004016 AV530_004016 CUL1 CUL1 AV530_004882 AV530_004882 MFHAS1 MFHAS1 HLTF HLTF FBXW7 FBXW7 AV530_017564 AV530_017564 BRCA1 BRCA1 RNF34 RNF34 UBE2L3 UBE2L3 CHEK2 CHEK2 FZD4 FZD4 CASC3 CASC3 SPOP SPOP NGFR NGFR AV530_013603 AV530_013603 SMC6 SMC6 TRIB2 TRIB2 MYOD1 MYOD1 TSG101 TSG101 SLC22A18 SLC22A18 BAG2 BAG2 PARK2 PARK2 UBE2J1 UBE2J1 BCL2 BCL2 DBT DBT GLMN GLMN RPL5 RPL5 PRKACB PRKACB BCL10 BCL10 ATF6 ATF6 PRKAR2B PRKAR2B GPI GPI MAP1LC3B MAP1LC3B GABARAPL2 GABARAPL2 NLK NLK TRIM37 TRIM37 TRAF4 TRAF4 UBC UBC RFFL RFFL AV530_002963 AV530_002963 AV530_002962 AV530_002962 CUL3 CUL3 UBE2G1 UBE2G1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
USP13Ubiquitin carboxyl-terminal hydrolase. (848 aa)
SPOPLSpeckle-type POZ protein-like. (392 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (730 aa)
RALBRas-related protein Ral-B. (275 aa)
TANKTRAF family member-associated NF-kappa-B activator. (482 aa)
AV530_008919CULLIN_2 domain-containing protein; Belongs to the cullin family. (267 aa)
AV530_008920Uncharacterized protein. (75 aa)
CCT2T-complex protein 1 subunit beta. (535 aa)
FBXO7F-box only protein 7. (516 aa)
BIDBH3-interacting domain death agonist. (309 aa)
SMAD7Mothers against decapentaplegic-like protein 7. (181 aa)
FHITBis(5'-adenosyl)-triphosphatase. (112 aa)
SPG20Spartin isoform B. (631 aa)
DNM1LDynamin-1-like protein isoform B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (735 aa)
AV530_012142Ubiquitin thioesterase OTUB1. (71 aa)
AUP1Ancient ubiquitous protein 1. (424 aa)
CUL5Cullin-5; Belongs to the cullin family. (782 aa)
JKAMPJNK1/MAPK8-associated membrane protein. (314 aa)
RTN1Reticulon. (758 aa)
TRAF3TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (567 aa)
ATXN3Ataxin-3. (363 aa)
AV530_014664Cullin-9. (154 aa)
PSMA3Proteasome subunit alpha type. (255 aa)
ASB4Ankyrin repeat and SOCS box protein 4. (435 aa)
BAG5BAG family molecular chaperone regulator 5. (450 aa)
SNCAIPSynphilin-1. (914 aa)
CUL9Cullin-9 isoform A. (721 aa)
FAF1FAS-associated factor 1. (713 aa)
SCAMP3Secretory carrier-associated membrane protein. (345 aa)
AV530_000404Uncharacterized protein. (145 aa)
SMG5Protein SMG5. (625 aa)
PRR5LProline-rich protein 5-like. (349 aa)
AV530_013971RNA_pol_Rpb1_7 domain-containing protein. (101 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (523 aa)
LYNTyrosine-protein kinase. (557 aa)
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1 isoform A. (1260 aa)
LAPTM4BLysosomal-associated transmembrane protein 4B. (224 aa)
YWHAZ14-3-3 protein zeta/delta; Belongs to the 14-3-3 family. (373 aa)
DERL1Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (302 aa)
BAG4BAG family molecular chaperone regulator 4. (321 aa)
ERLIN2Erlin-2 isoform B. (342 aa)
AV530_015727Uncharacterized protein. (356 aa)
SLF2Protein FAM178A. (778 aa)
VCLVinculin isoform B. (1135 aa)
CACUL1CDK2-associated and cullin domain-containing protein 1 isoform B; Belongs to the cullin family. (304 aa)
HM13Minor histocompatibility antigen H13 isoform A. (389 aa)
CD40Tumor necrosis factor receptor superfamily member 5 isoform A. (280 aa)
CUL2Cullin-2; Belongs to the cullin family. (745 aa)
FZD8Frizzled-8 isoform A; Belongs to the G-protein coupled receptor Fz/Smo family. (507 aa)
SYT11Synaptotagmin-11. (436 aa)
TXNIPRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (625 aa)
AV530_011239Uncharacterized protein. (218 aa)
SKISki oncogene. (359 aa)
UBE2J2Ubiquitin-conjugating enzyme E2 J2. (356 aa)
TNFRSF1BTumor necrosis factor receptor superfamily member 1B. (441 aa)
MFN2Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (755 aa)
TNFRSF8Tumor necrosis factor receptor superfamily member 8 isoform B. (484 aa)
MUL1Mitochondrial ubiquitin ligase activator of NFKB 1. (352 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (581 aa)
TRAF2TNF receptor-associated factor. (472 aa)
AV530_014730MH1 domain-containing protein. (90 aa)
PIAS4E3 SUMO-protein ligase PIAS4. (495 aa)
UBA52Ubiquitin-60S ribosomal protein L40. (128 aa)
AV530_009009Uncharacterized protein. (198 aa)
FAM178BProtein FAM178B isoform A. (672 aa)
PRKAR1BcAMP-dependent protein kinase type I-beta regulatory subunit. (433 aa)
UBXN7UBX domain-containing protein 7. (383 aa)
AV530_010985Cullin-9-like. (561 aa)
AXIN1Axin-1. (841 aa)
SQSTM1Sequestosome-1. (453 aa)
FAF2FAS-associated factor 2. (445 aa)
CAMLGCalcium signal-modulating cyclophilin ligand; Likely involved in the mobilization of calcium as a result of the TCR/CD3 complex interaction. Binds to cyclophilin B. (292 aa)
UBE2BUbiquitin-conjugating enzyme E2 B isoform C; Belongs to the ubiquitin-conjugating enzyme family. (222 aa)
TRIB1Tribbles-like protein 1. (354 aa)
PRKAR1AcAMP-dependent protein kinase type I-alpha regulatory subunit. (382 aa)
AXIN2Axin-2 isoform B. (829 aa)
UBE2TUbiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (197 aa)
YOD1Ubiquitin thioesterase OTU1. (304 aa)
RALARas-related protein Ral-A. (172 aa)
FATE1Fetal and adult testis-expressed transcript protein isoform A. (249 aa)
AV530_003886Cullin domain-containing protein; Belongs to the cullin family. (200 aa)
AV530_003887CULLIN_2 domain-containing protein; Belongs to the cullin family. (614 aa)
UBE2AUbiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
AV530_016124E3 ubiquitin protein ligase. (98 aa)
AV530_003871Cyclic nucleotide-binding domain-containing protein. (118 aa)
FZD5Frizzled-5 isoform B; Belongs to the G-protein coupled receptor Fz/Smo family. (576 aa)
STX8Syntaxin-8. (236 aa)
HSPD1Heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family. (573 aa)
ANKRA2Ankyrin repeat family A protein 2. (313 aa)
USP19Ubiquitin carboxyl-terminal hydrolase 19 isoform C. (1384 aa)
SLF1Ankyrin repeat domain-containing protein 32. (925 aa)
PRKAR2AcAMP-dependent protein kinase type II-alpha regulatory subunit. (400 aa)
LAPTM5Lysosomal-associated transmembrane protein 5. (258 aa)
AV530_004682PINc domain-containing protein. (380 aa)
NDUFS2NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial. (334 aa)
UBOX5RING finger protein 37. (532 aa)
UBE2KUbiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
PPARGC1APeroxisome proliferator-activated receptor gamma coactivator 1-alpha. (795 aa)
PACRGLPACRG-like protein. (238 aa)
WFS1Wolframin isoform B. (705 aa)
SMAD6Mothers against decapentaplegic homolog. (423 aa)
DET1DET1-like protein. (543 aa)
ARIH1RBR-type E3 ubiquitin transferase. (445 aa)
AV530_019282Protein PML. (595 aa)
AV530_019284Protein PML. (842 aa)
UBASH3AUbiquitin-associated and SH3 domain-containing protein A. (626 aa)
AICDASingle-stranded DNA cytosine deaminase. (221 aa)
TPI1Triosephosphate isomerase. (248 aa)
GABARAPL1Gamma-aminobutyric acid receptor-associated protein-like 1. (120 aa)
TMBIM6Bax inhibitor 1; Belongs to the BI1 family. (236 aa)
RANGAP1Ran GTPase-activating protein 1. (586 aa)
UBASH3BUbiquitin-associated and SH3 domain-containing protein B. (639 aa)
ANAPC2Anaphase-promoting complex subunit 2; Belongs to the cullin family. (484 aa)
RB1Retinoblastoma-associated protein isoform A. (1170 aa)
ARRDC1Arrestin domain-containing protein 1. (423 aa)
AV530_002121Uncharacterized protein. (419 aa)
HSPA5Glucose-regulated protein; Belongs to the heat shock protein 70 family. (620 aa)
TRAF1TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (558 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
RTN4Reticulon. (1176 aa)
FANCLE3 ubiquitin-protein ligase FANCL. (374 aa)
AV530_004421Uncharacterized protein. (606 aa)
BLZF1Golgin-45. (393 aa)
CUL4ACullin-4A; Belongs to the cullin family. (770 aa)
AV530_000488Uncharacterized protein. (85 aa)
DDX58Putative ATP-dependent RNA helicase DDX58. (884 aa)
MAP1LC3CMicrotubule-associated proteins 1A/1B light chain 3C. (143 aa)
SNX9Sorting nexin. (600 aa)
PACRGParkin coregulated protein. (329 aa)
SHPRHE3 ubiquitin-protein ligase SHPRH. (1695 aa)
PA2G4Proliferation-associated protein 2G4. (349 aa)
AV530_014708F-box domain-containing protein. (162 aa)
LRPPRCLeucine-rich PPR motif-containing protein, mitochondrial. (1387 aa)
TRAF5TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (557 aa)
RAD18E3 ubiquitin-protein ligase RAD18 isoform C. (568 aa)
CACYBPCalcyclin-binding protein. (242 aa)
AV530_004017Caspase-8; Belongs to the peptidase C14A family. (490 aa)
AV530_014171E3 ubiquitin protein ligase. (79 aa)
MC4RMelanocortin receptor 4. (331 aa)
CASP10Caspase-10; Belongs to the peptidase C14A family. (467 aa)
AV530_004016Caspase-8; Belongs to the peptidase C14A family. (373 aa)
CUL1Cullin-1; Belongs to the cullin family. (776 aa)
AV530_004882Leucine-rich repeat-containing protein 40. (266 aa)
MFHAS1Malignant fibrous histiocytoma-amplified sequence 1. (1149 aa)
HLTFHelicase-like transcription factor. (904 aa)
FBXW7F-box/WD repeat-containing protein 7 isoform B. (703 aa)
AV530_017564WD_REPEATS_REGION domain-containing protein. (199 aa)
BRCA1Breast cancer type 1 susceptibility protein. (1749 aa)
RNF34E3 ubiquitin-protein ligase RNF34. (352 aa)
UBE2L3Ubiquitin-conjugating enzyme E2 L3 isoform A; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
CHEK2Serine/threonine-protein kinase Chk2. (522 aa)
FZD4Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family. (475 aa)
CASC3Protein CASC3. (1123 aa)
SPOPSpeckle-type POZ protein. (374 aa)
NGFRTumor necrosis factor receptor superfamily member 16. (392 aa)
AV530_013603Ubiquitin-conjugating enzyme E2-18 kDa. (150 aa)
SMC6Structural maintenance of chromosomes protein 6. (1122 aa)
TRIB2Tribbles-like protein 2. (343 aa)
MYOD1Myogenic factor. (298 aa)
TSG101Tumor susceptibility 101 protein. (391 aa)
SLC22A18Solute carrier family 22 member 18. (432 aa)
BAG2BAG family molecular chaperone regulator 2. (220 aa)
PARK2RBR-type E3 ubiquitin transferase. (510 aa)
UBE2J1Ubiquitin-conjugating enzyme E2 J1 isoform A. (319 aa)
BCL2Apoptosis regulator Bcl-2. (235 aa)
DBTDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (538 aa)
GLMNGlomulin isoform B. (606 aa)
RPL560S ribosomal protein L5. (297 aa)
PRKACBcAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily. (375 aa)
BCL10B-cell lymphoma/leukemia 10. (242 aa)
ATF6Cyclic AMP-dependent transcription factor ATF-6 alpha isoform A. (652 aa)
PRKAR2BcAMP-dependent protein kinase type II-beta regulatory subunit. (418 aa)
GPIGlucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
MAP1LC3BMicrotubule-associated proteins 1A/1B light chain 3B. (125 aa)
GABARAPL2Gamma-aminobutyric acid receptor-associated protein-like 2. (117 aa)
NLKMitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (444 aa)
TRIM37E3 ubiquitin-protein ligase TRIM37. (971 aa)
TRAF4TNF receptor-associated factor. (470 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
RFFLE3 ubiquitin-protein ligase rififylin isoform B. (395 aa)
AV530_002963SP-RING-type domain-containing protein. (272 aa)
AV530_002962Uncharacterized protein. (294 aa)
CUL3Cullin-3; Belongs to the cullin family. (782 aa)
UBE2G1Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (211 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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