41 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TMUB1	Transmembrane and ubiquitin-like domain-containing 1. (145 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	UBLCP1	Ubiquitin-like domain-containing CTD phosphatase 1. (318 aa)
	UBTD2	Ubiquitin domain-containing protein 2 isoform A. (375 aa)
	SNRNP25	U11/U12 small nuclear ribonucleoprotein. (91 aa)
	UBA52	Ubiquitin-60S ribosomal protein L40. (128 aa)
	MIDN	Midnolin. (486 aa)
	AV530_008733	RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (363 aa)
	HSPG2	Basement membrane-specific heparan sulfate proteoglycan core protein isoform B; Belongs to the peptidase C19 family. (2698 aa)
	AV530_011429	Regulatory solute carrier protein family 1 member 1. (849 aa)
	NUB1	NEDD8 ultimate buster 1. (646 aa)
	ZFAND4	AN1-type zinc finger protein 4. (702 aa)
	UBTD1	Ubiquitin domain-containing protein 1. (226 aa)
	USP14	Ubiquitin carboxyl-terminal hydrolase. (492 aa)
	AV530_016370	Ubiquitin-like domain-containing protein. (73 aa)
	UBQLN1	Ubiquilin-1 isoform B. (580 aa)
	SACS	Sacsin isoform B. (4602 aa)
	UBL3	Ubiquitin-like protein. (117 aa)
	AV530_004200	2'-5'-oligoadenylate synthase 1. (518 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	USP32	Ubiquitin carboxyl-terminal hydrolase 32 isoform B; Belongs to the peptidase C19 family. (1803 aa)
	HERPUD1	Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein. (380 aa)
	UHRF1	E3 ubiquitin-protein ligase UHRF1 isoform A. (712 aa)
	USP24	Ubiquitin carboxyl-terminal hydrolase 24 isoform B; Belongs to the peptidase C19 family. (2551 aa)
	SUMO1	Small ubiquitin-related modifier. (101 aa)
	AV530_010142	Small ubiquitin-related modifier. (102 aa)
	SF3A1	Splicing factor 3A subunit 1. (783 aa)
	PARK2	RBR-type E3 ubiquitin transferase. (510 aa)
	TBCE	Tubulin-specific chaperone E. (610 aa)
	UBQLN4	Ubiquilin-4 isoform B. (837 aa)
	UBL7	Ubiquitin-like protein 7 isoform B. (375 aa)
	UBXN11	UBX domain-containing protein 11 isoform B. (421 aa)
	UHRF2	E3 ubiquitin-protein ligase UHRF2 isoform B. (817 aa)
	BAG1	BAG family molecular chaperone regulator 1. (209 aa)
	AV530_002651	Ubiquilin-1. (589 aa)
	HERPUD2	Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. (406 aa)
	CARD8	Caspase recruitment domain-containing protein 8. (539 aa)
	RAD23B	UV excision repair RAD23-like protein B. (400 aa)
	AV530_016328	Ubiquitin-like domain-containing protein. (136 aa)
	SUMO2	Small ubiquitin-related modifier. (95 aa)
	ERN2	Serine/threonine-protein kinase/endoribonuclease IRE2. (1199 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_002651	AV530_004200	A0A1V4J5G1	A0A1V4K8T1	Ubiquilin-1.	2'-5'-oligoadenylate synthase 1.	0.792
AV530_002651	AV530_008733	A0A1V4J5G1	A0A1V4KPY7	Ubiquilin-1.	RanBP-type and C3HC4-type zinc finger-containing protein 1-like.	0.567
AV530_002651	AV530_010142	A0A1V4J5G1	A0A1V4JSQ0	Ubiquilin-1.	Small ubiquitin-related modifier.	0.664
AV530_002651	AV530_011429	A0A1V4J5G1	A0A1V4KPB7	Ubiquilin-1.	Regulatory solute carrier protein family 1 member 1.	0.612
AV530_002651	BAG1	A0A1V4J5G1	A0A1V4J8Q0	Ubiquilin-1.	BAG family molecular chaperone regulator 1.	0.765
AV530_002651	CARD8	A0A1V4J5G1	A0A1V4J2B8	Ubiquilin-1.	Caspase recruitment domain-containing protein 8.	0.409
AV530_002651	HSPG2	A0A1V4J5G1	A0A1V4KPG6	Ubiquilin-1.	Basement membrane-specific heparan sulfate proteoglycan core protein isoform B; Belongs to the peptidase C19 family.	0.726
AV530_002651	NUB1	A0A1V4J5G1	A0A1V4KLE0	Ubiquilin-1.	NEDD8 ultimate buster 1.	0.725
AV530_002651	PARK2	A0A1V4J5G1	A0A1V4JM44	Ubiquilin-1.	RBR-type E3 ubiquitin transferase.	0.832
AV530_002651	RAD23B	A0A1V4J5G1	A0A1V4IPS0	Ubiquilin-1.	UV excision repair RAD23-like protein B.	0.711
AV530_002651	RPS27A	A0A1V4J5G1	A0A1V4IG00	Ubiquilin-1.	Ubiquitin-40S ribosomal protein S27a.	0.890
AV530_002651	SACS	A0A1V4J5G1	A0A1V4K9Q0	Ubiquilin-1.	Sacsin isoform B.	0.584
AV530_002651	SUMO1	A0A1V4J5G1	A0A1V4JX72	Ubiquilin-1.	Small ubiquitin-related modifier.	0.664
AV530_002651	SUMO2	A0A1V4J5G1	A0A1V4KWD6	Ubiquilin-1.	Small ubiquitin-related modifier.	0.664
AV530_002651	UBA52	A0A1V4J5G1	A0A1V4KQG5	Ubiquilin-1.	Ubiquitin-60S ribosomal protein L40.	0.931
AV530_002651	UBC	A0A1V4J5G1	A0A1V4K2F8	Ubiquilin-1.	Polyubiquitin-C isoform A.	0.936
AV530_002651	UBL7	A0A1V4J5G1	A0A1V4JDC8	Ubiquilin-1.	Ubiquitin-like protein 7 isoform B.	0.572
AV530_002651	UBLCP1	A0A1V4J5G1	A0A1V4KU83	Ubiquilin-1.	Ubiquitin-like domain-containing CTD phosphatase 1.	0.777
AV530_002651	UBQLN4	A0A1V4J5G1	A0A1V4JIB1	Ubiquilin-1.	Ubiquilin-4 isoform B.	0.879
AV530_002651	USP14	A0A1V4J5G1	A0A1V4KG31	Ubiquilin-1.	Ubiquitin carboxyl-terminal hydrolase.	0.811