STRINGSTRING
UBA52 UBA52 ERN2 ERN2 USP14 USP14 UBC UBC RPS27A RPS27A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBA52Ubiquitin-60S ribosomal protein L40. (128 aa)
ERN2Serine/threonine-protein kinase/endoribonuclease IRE2. (1199 aa)
USP14Ubiquitin carboxyl-terminal hydrolase. (492 aa)
UBCPolyubiquitin-C isoform A. (365 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (178 aa)
Your Current Organism:
Patagioenas fasciata
NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.