22 items (Patagioenas fasciata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HIF1A	Hypoxia-inducible factor 1-alpha. (802 aa)
	PSMC1	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	EGLN3	Egl nine-like protein 3. (241 aa)
	TCEB1	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (68 aa)
	PSMA7	Proteasome subunit alpha type. (248 aa)
	CUL2	Cullin-2; Belongs to the cullin family. (745 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (944 aa)
	UBE2D2	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (291 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (226 aa)
	AV530_014876	CSN8_PSD8_EIF3K domain-containing protein. (75 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	PSME4	Proteasome activator complex subunit 4 isoform A. (1824 aa)
	RBX1	E3 ubiquitin-protein ligase RBX1. (108 aa)
	EPAS1	Endothelial PAS domain-containing protein 1 isoform C. (891 aa)
	AV530_012300	26S protease regulatory subunit 6B-like. (85 aa)
	AV530_005262	Egl nine-like protein 1. (332 aa)
	PSMA1	Proteasome subunit alpha type. (261 aa)
	UBE2D3	Ubiquitin-conjugating enzyme E2 D3 isoform B; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (544 aa)
	UBE2D1-2	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	LIMD1	LIM domain-containing protein 1. (496 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AV530_005262	CUL2	A0A1V4JLV8	A0A1V4KLM2	Egl nine-like protein 1.	Cullin-2; Belongs to the cullin family.	0.682
AV530_005262	EPAS1	A0A1V4JLV8	A0A1V4JJL2	Egl nine-like protein 1.	Endothelial PAS domain-containing protein 1 isoform C.	0.968
AV530_005262	HIF1A	A0A1V4JLV8	A0A1V4KA36	Egl nine-like protein 1.	Hypoxia-inducible factor 1-alpha.	0.969
AV530_005262	LIMD1	A0A1V4JLV8	A0A1V4K753	Egl nine-like protein 1.	LIM domain-containing protein 1.	0.701
AV530_005262	PSMC1	A0A1V4JLV8	A0A1V4KAT2	Egl nine-like protein 1.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.602
AV530_005262	PSMD10	A0A1V4JLV8	A0A1V4KZ57	Egl nine-like protein 1.	26S proteasome non-ATPase regulatory subunit 10.	0.460
AV530_005262	RBX1	A0A1V4JLV8	A0A1V4JB31	Egl nine-like protein 1.	E3 ubiquitin-protein ligase RBX1.	0.630
AV530_005262	RPS27A	A0A1V4JLV8	A0A1V4IG00	Egl nine-like protein 1.	Ubiquitin-40S ribosomal protein S27a.	0.624
AV530_005262	TCEB1	A0A1V4JLV8	A0A1V4KGL2	Egl nine-like protein 1.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.748
AV530_005262	UBC	A0A1V4JLV8	A0A1V4K2F8	Egl nine-like protein 1.	Polyubiquitin-C isoform A.	0.629
AV530_005262	UBE2D1-2	A0A1V4JLV8	A0A1V4K6I4	Egl nine-like protein 1.	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.	0.558
AV530_005262	UBE2D2	A0A1V4JLV8	A0A1V4KUZ9	Egl nine-like protein 1.	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.	0.558
AV530_005262	UBE2D3	A0A1V4JLV8	A0A1V4JU84	Egl nine-like protein 1.	Ubiquitin-conjugating enzyme E2 D3 isoform B; Belongs to the ubiquitin-conjugating enzyme family.	0.558
AV530_012300	AV530_014876	A0A1V4JKJ9	A0A1V4L198	26S protease regulatory subunit 6B-like.	CSN8_PSD8_EIF3K domain-containing protein.	0.999
AV530_012300	CUL2	A0A1V4JKJ9	A0A1V4KLM2	26S protease regulatory subunit 6B-like.	Cullin-2; Belongs to the cullin family.	0.628
AV530_012300	EPAS1	A0A1V4JKJ9	A0A1V4JJL2	26S protease regulatory subunit 6B-like.	Endothelial PAS domain-containing protein 1 isoform C.	0.646
AV530_012300	HIF1A	A0A1V4JKJ9	A0A1V4KA36	26S protease regulatory subunit 6B-like.	Hypoxia-inducible factor 1-alpha.	0.647
AV530_012300	LIMD1	A0A1V4JKJ9	A0A1V4K753	26S protease regulatory subunit 6B-like.	LIM domain-containing protein 1.	0.608
AV530_012300	PSMA1	A0A1V4JKJ9	A0A1V4JNV2	26S protease regulatory subunit 6B-like.	Proteasome subunit alpha type.	0.996
AV530_012300	PSMA7	A0A1V4JKJ9	A0A1V4KKG5	26S protease regulatory subunit 6B-like.	Proteasome subunit alpha type.	0.998