85 items (Patagioenas fasciata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ITSN1	Intersectin-1 isoform B. (1580 aa)
	TIAM1	T-lymphoma invasion and metastasis-inducing protein 1 isoform B. (1613 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (178 aa)
	SOS1	Son of sevenless-like protein 1. (1345 aa)
	ARHGEF33	Rho guanine nucleotide exchange factor 33. (643 aa)
	AV530_009265	Uncharacterized protein. (71 aa)
	FGD3	FYVE, RhoGEF and PH domain-containing protein 3. (867 aa)
	AV530_019256	Uncharacterized protein. (141 aa)
	CASP2	Caspase-2; Belongs to the peptidase C14A family. (568 aa)
	VAV2	Guanine nucleotide exchange factor VAV2 isoform B. (1478 aa)
	ARHGDIA	Rho GDP-dissociation inhibitor 1. (204 aa)
	AV530_018979	DH domain-containing protein. (196 aa)
	AV530_000265	Uncharacterized protein. (319 aa)
	ARHGEF7	Rho guanine nucleotide exchange factor 7. (803 aa)
	MCF2L	Guanine nucleotide exchange factor DBS isoform D. (1312 aa)
	UBC	Polyubiquitin-C isoform A. (365 aa)
	ABR	Active breakpoint cluster region-related protein isoform B. (901 aa)
	AATF	Protein AATF. (571 aa)
	ARHGEF17	Rho guanine nucleotide exchange factor 17. (1015 aa)
	AV530_009507	PH domain-containing protein. (249 aa)
	MCF2L2	Putative guanine nucleotide exchange factor MCF2L2 isoform A. (1255 aa)
	ARHGEF3	Rho guanine nucleotide exchange factor 3 isoform A. (564 aa)
	PSEN2	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (457 aa)
	AV530_011470	Uncharacterized protein. (92 aa)
	TIAM2	T-lymphoma invasion and metastasis-inducing protein 2 isoform A. (1670 aa)
	ARHGEF10	Rho guanine nucleotide exchange factor 10 isoform B. (1354 aa)
	ADAM17	Disintegrin and metalloproteinase domain-containing protein 17. (829 aa)
	NGFR	Tumor necrosis factor receptor superfamily member 16. (392 aa)
	AV530_019865	Gamma-secretase subunit Aph-1b. (256 aa)
	ARHGEF39	Rho guanine nucleotide exchange factor 39. (338 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit isoform B. (1044 aa)
	ARHGEF38	Rho guanine nucleotide exchange factor 38. (347 aa)
	AV530_018227	RGS-like domain-containing protein. (314 aa)
	AV530_015121	Receptor-interacting serine/threonine-protein kinase 2. (590 aa)
	GSAP	Gamma-secretase-activating protein. (846 aa)
	VAV3	Guanine nucleotide exchange factor VAV3. (781 aa)
	ITGB3BP	Centromere protein R. (198 aa)
	TRIO	Triple functional domain protein isoform A. (3076 aa)
	NET1	Neuroepithelial cell-transforming 1 protein. (537 aa)
	AKAP13	A-kinase anchor protein 13 isoform D. (2716 aa)
	SESTD1	SEC14 domain and spectrin repeat-containing protein 1. (696 aa)
	OBSL1	Obscurin-like protein 1. (2197 aa)
	KALRN	Kalirin isoform D. (2951 aa)
	AV530_005130	Uncharacterized protein. (1782 aa)
	NGEF	Ephexin-1 isoform A. (684 aa)
	PRKCI	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (601 aa)
	NCSTN	Nicastrin. (703 aa)
	AV530_007127	DH domain-containing protein. (370 aa)
	ARHGEF12	Rho guanine nucleotide exchange factor 12. (285 aa)
	AV530_004092	RGS-like domain-containing protein. (127 aa)
	AV530_007128	Ras-GEF domain-containing protein. (352 aa)
	AV530_003914	Uncharacterized protein. (1481 aa)
	ARHGEF6	Rho guanine nucleotide exchange factor 6. (766 aa)
	MCF2	Proto-oncogene DBL. (1103 aa)
	AV530_010167	RGS-like domain-containing protein. (90 aa)
	AV530_019127	DH domain-containing protein. (365 aa)
	NGF	Beta-nerve growth factor isoform A; Belongs to the NGF-beta family. (235 aa)
	ARHGEF37	Rho guanine nucleotide exchange factor 37 isoform B. (720 aa)
	SQSTM1	Sequestosome-1. (453 aa)
	AV530_014219	Uncharacterized protein. (179 aa)
	KXD1	KxDL motif-containing protein 1. (190 aa)
	ARHGEF10L	Rho guanine nucleotide exchange factor 10-like protein isoform A. (1278 aa)
	TNFRSF25	Tumor necrosis factor receptor superfamily member 25. (427 aa)
	PLEKHG5	Pleckstrin-like proteiny domain-containing family G member 5 isoform B. (1076 aa)
	AV530_018210	Protein-glutamine gamma-glutamyltransferase E. (692 aa)
	AV530_018100	Protein-glutamine gamma-glutamyltransferase 6. (696 aa)
	APH1A	Gamma-secretase subunit APH-1A. (248 aa)
	AV530_009235	Uncharacterized protein. (665 aa)
	ARHGEF26	Rho guanine nucleotide exchange factor 26 isoform A. (916 aa)
	MYD88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (276 aa)
	AV530_007062	Uncharacterized protein. (97 aa)
	AV530_007059	DH domain-containing protein. (158 aa)
	VAV1	Proto-oncogene vav. (365 aa)
	AV530_007060	Calponin-homology (CH) domain-containing protein. (367 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (757 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (523 aa)
	PSEN1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (468 aa)
	AV530_000205	RGS-like domain-containing protein. (173 aa)
	AV530_000206	Rho guanine nucleotide exchange factor 11. (912 aa)
	AV530_008514	PH domain-containing protein. (132 aa)
	ARHGEF5	Rho guanine nucleotide exchange factor 5. (1758 aa)
	PRDM4	PR domain zinc finger protein 4; May function as a transcription factor involved in cell differentiation. (800 aa)
	FGD4	FYVE, RhoGEF and PH domain-containing protein 4. (829 aa)
	AV530_009431	Uncharacterized protein. (92 aa)
	AV530_008320	Uncharacterized protein. (198 aa)

Your Current Organism:

Patagioenas fasciata

NCBI taxonomy Id: 372326
Other names: P. fasciata monilis, Patagioenas fasciata monilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AATF	RPS27A	A0A1V4K1X0	A0A1V4IG00	Protein AATF.	Ubiquitin-40S ribosomal protein S27a.	0.660
ABR	AV530_003914	A0A1V4K282	A0A1V4KZC6	Active breakpoint cluster region-related protein isoform B.	Uncharacterized protein.	0.414
ABR	AV530_005130	A0A1V4K282	A0A1V4K4C1	Active breakpoint cluster region-related protein isoform B.	Uncharacterized protein.	0.414
ADAM17	NCSTN	A0A1V4JMX6	A0A1V4L180	Disintegrin and metalloproteinase domain-containing protein 17.	Nicastrin.	0.585
ADAM17	PSEN1	A0A1V4JMX6	A0A1V4KEW2	Disintegrin and metalloproteinase domain-containing protein 17.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.412
AKAP13	ARHGEF10	A0A1V4JF74	A0A1V4JMR2	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 10 isoform B.	0.516
AKAP13	ARHGEF10L	A0A1V4JF74	A0A1V4KP61	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 10-like protein isoform A.	0.505
AKAP13	ARHGEF12	A0A1V4JF74	A0A1V4KZW1	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 12.	0.598
AKAP13	ARHGEF17	A0A1V4JF74	A0A1V4JGT5	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 17.	0.505
AKAP13	ARHGEF26	A0A1V4JF74	A0A1V4KM02	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 26 isoform A.	0.461
AKAP13	ARHGEF33	A0A1V4JF74	A0A1V4IFL0	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 33.	0.505
AKAP13	ARHGEF5	A0A1V4JF74	A0A1V4K9T4	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 5.	0.500
AKAP13	ARHGEF6	A0A1V4JF74	A0A1V4KYZ2	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 6.	0.525
AKAP13	ARHGEF7	A0A1V4JF74	A0A1V4J3X8	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 7.	0.525
AKAP13	AV530_000205	A0A1V4JF74	A0A1V4KDS0	A-kinase anchor protein 13 isoform D.	RGS-like domain-containing protein.	0.598
AKAP13	AV530_000206	A0A1V4JF74	A0A1V4KDL2	A-kinase anchor protein 13 isoform D.	Rho guanine nucleotide exchange factor 11.	0.598
AKAP13	AV530_004092	A0A1V4JF74	A0A1V4KZQ2	A-kinase anchor protein 13 isoform D.	RGS-like domain-containing protein.	0.598
AKAP13	AV530_008320	A0A1V4JF74	A0A1V4K6R0	A-kinase anchor protein 13 isoform D.	Uncharacterized protein.	0.598
AKAP13	AV530_009507	A0A1V4JF74	A0A1V4JGY6	A-kinase anchor protein 13 isoform D.	PH domain-containing protein.	0.598
AKAP13	AV530_010167	A0A1V4JF74	A0A1V4KY28	A-kinase anchor protein 13 isoform D.	RGS-like domain-containing protein.	0.598